Shewanella amazonensis: Sama_1934
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Entry
Sama_1934 CDS
T00445
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
saz
Shewanella amazonensis
Pathway
saz00061
Fatty acid biosynthesis
saz00071
Fatty acid degradation
saz01100
Metabolic pathways
saz01212
Fatty acid metabolism
saz02024
Quorum sensing
saz04146
Peroxisome
Module
saz_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
saz00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Sama_1934
00071 Fatty acid degradation
Sama_1934
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Sama_1934
09145 Cellular community - prokaryotes
02024 Quorum sensing
Sama_1934
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
saz01004
]
Sama_1934
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
saz04147
]
Sama_1934
Enzymes [BR:
saz01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Sama_1934
Lipid biosynthesis proteins [BR:
saz01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Sama_1934
Exosome [BR:
saz04147
]
Exosomal proteins
Exosomal proteins of breast milk
Sama_1934
Exosomal proteins of breast cancer cells
Sama_1934
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
ABM00140
UniProt:
A1S6Y3
LinkDB
All DBs
Position
complement(2360791..2362467)
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AA seq
558 aa
AA seq
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MDKPWINHLPHDVPAEIDAGRFDSLVDMFEQAVRDYADQPAFINMGAVLTYRKLEERSRA
FAAYLQNELGLKKGDRVALMMPNLLQYPIALFGVLRAGLVVVNVNPLYTPRELKHQLIDS
GAKTIVVVSNFARTLEEVVDDTPVESVIITGLGDLLSAPKRTLVNFVVKYIKKLVPKYDL
PHAISFRSALQKGRRMQYVKPELDIDTLAFLQYTGGTTGVSKGAMLSHGNVVANVLQANG
AYAPLLADGKEFVVTALPLYHIFALTVNCLLFLHKGAQNLLITNPRDIPAFISDLRKYPF
TALTGVNTLFNALVNNEEFTQLDFSRLKLSIGGGMAVQRAVADKWQSITKTRLLEGYGLT
EASPLVACCPYNLEGYNGSIGFPAPSTLMQVRDDDGNVLPQGETGELFAKGPQVMKGYWQ
RPEETTKVIDANGWLATGDIGYMDEQGFFYIVDRKKDMILVSGFNVFPNEVEDVVAMHPK
VIEVAAIGVPNDASGEIVKVFVVAKDKSLTESDVIKHCKHHLTGYKVPKLVEFRDELPKT
NVGKILRRELRNEELNKA
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
gtggacaagccttggattaatcatttgccacacgatgtgcctgctgaaattgatgcgggc
agatttgacagtttggtcgacatgtttgaacaggcggtgagggattacgccgatcaacca
gcctttattaacatgggtgcggtgttgacctaccgtaaactggaagagcgcagccgcgcc
tttgccgcctacctgcaaaacgagcttggtcttaagaagggtgacagggtcgcgctgatg
atgcccaatctgctgcaataccccattgcactgtttggtgtgctgcgtgcaggcttagtg
gtggtgaacgtcaatccgctgtataccccgcgggagcttaagcatcaactgattgattct
ggagcgaaaaccatcgtagtcgtgtcaaattttgcccgcacccttgaagaggttgtggac
gacacgccggtagaaagcgtcattattactgggcttggcgacttgctgagcgcgcccaag
cgtaccttggtgaactttgtggtgaagtacatcaaaaagttggtgcccaagtacgatttg
ccacatgctatttccttcaggagcgccctgcaaaaaggccgccgtatgcagtatgtcaag
ccagagctcgacatagatacactggcgtttttgcaatacacaggtggcactacgggcgta
tcaaaaggcgccatgctgagccacggtaacgtggttgccaacgtattacaggctaatgga
gcctatgcgccgctgctggccgatggtaaggagtttgtggtcacggctctgccgctttat
cacatctttgctttaacggtgaattgcttgctgttcctgcataaaggcgcacaaaacctg
cttattaccaacccccgtgacattccggcctttatatcggacctgcgcaagtatcctttt
accgcgctgaccggggtgaatacgctctttaacgccctggtgaacaacgaagagtttacc
cagctggatttctctcgccttaaactgtctattggcggcggtatggcggtgcagcgcgcg
gtcgccgacaagtggcagagtatcaccaaaacccgcttgcttgagggctatggtttgaca
gaagcttcgccgctggtggcctgctgcccctataaccttgaaggttacaacggttctatt
ggtttcccggcgccttcgaccctgatgcaggtgcgtgacgatgatgggaatgttctgccc
cagggcgaaacaggtgaactcttcgccaaaggtccccaagtgatgaaaggctactggcaa
cgcccggaagaaaccaccaaagtaatagatgccaatggttggcttgccaccggtgatatc
ggttacatggatgaacagggatttttctacatagtcgatcgcaagaaagacatgatcctg
gtgtcgggcttcaacgtgtttcccaatgaggtggaagatgtggttgccatgcacccgaaa
gtgattgaagtcgccgccatcggcgtgcccaatgacgccagtggtgaaatcgttaaagtc
tttgtggtagccaaagacaaatctttgaccgaaagcgatgttatcaagcactgcaagcat
catttaacgggctataaggttcctaagctggtagaattccgcgatgagttacctaagacc
aacgtgggtaaaatattgcgccgagagcttagaaacgaggagcttaacaaggcgtga
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