Shewanella amazonensis: Sama_1950
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Entry
Sama_1950 CDS
T00445
Name
(GenBank) lipid A biosynthesis acyltransferase, putative
KO
K02560
lauroyl-Kdo2-lipid IVA myristoyltransferase [EC:
2.3.1.243
]
Organism
saz
Shewanella amazonensis
Pathway
saz00540
Lipopolysaccharide biosynthesis
saz01100
Metabolic pathways
Module
saz_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
saz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
Sama_1950
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
saz01005
]
Sama_1950
Enzymes [BR:
saz01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.243 acyl-Kdo2-lipid IVA acyltransferase
Sama_1950
Lipopolysaccharide biosynthesis proteins [BR:
saz01005
]
Lipid A
Sama_1950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lip_A_acyltrans
Motif
Other DBs
NCBI-ProteinID:
ABM00156
UniProt:
A1S6Z9
LinkDB
All DBs
Position
complement(2377316..2378242)
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AA seq
308 aa
AA seq
DB search
MRYFDRRFYWGLLHPRLWGTWVAIGVLLFFGALPAAIRDPIARGLSGLVLGIAKKPIRVA
RANIKACFPDKSDREVEALIRENVAQFVMILIGQAELLFGSDAHLRRRVSLHGFEHVKAA
RDAGQPIIFIMPHVWGIDYAGLRLNLEVPMATMAKAHRNELFNWFSNRIRSRLGGHVYMR
EAGLRVLISEMRQGNSFFYLPDEDLGPDQSVFAPLFATTKATLPVVGRLAAAGKAQVMPV
TIGYDDKAHRFSLTVLPAIDEATMAGKENEALALNRAVEQVISAYPEQYMWFLKLLKTRP
EGQASIYD
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgcgttattttgacagacgattttactggggactcctgcatccaagactgtggggaacc
tgggttgccatcggcgtcttgctcttttttggcgccttgcctgccgctattcgcgatccc
atcgcgcgtggtctgtccgggctggtactgggtatcgctaaaaagccaatccgggtagca
agggccaatattaaggcttgtttccctgacaaatcagatagggaagtggaggcgctaatt
cgtgagaatgtagcgcagttcgtgatgatcctgattgggcaggccgagctcctgttcggc
agtgacgctcatttacgccgccgcgtttcgctgcacggctttgagcacgtgaaagctgcc
cgcgacgctgggcagccaattattttcattatgccccatgtatggggtatagattacgcc
gggcttaggttaaaccttgaggtaccgatggcgaccatggccaaggcgcatcgtaatgaa
ctctttaattggttttccaaccgtatccgcagtcgccttggcggccatgtctacatgcgt
gaggcgggtcttagagtgctaatcagcgagatgcgccaggggaacagcttcttttactta
cctgacgaagatttagggccagatcaaagcgtatttgcaccgcttttcgctaccactaag
gccacattaccagtggtagggaggctggctgcagccggtaaagcccaggtgatgccggtg
accattggttacgatgataaggctcaccggttttcactcaccgtgctgcccgctatcgac
gaagcgaccatggcaggcaaagaaaatgaagcactggcgctcaaccgcgctgttgagcag
gttatttcggcctaccctgagcagtatatgtggtttttaaagctgcttaaaacccggcca
gagggccaggcgtctatttacgattga
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