KEGG   Shewanella amazonensis: Sama_2042
Entry
Sama_2042         CDS       T00445                                 
Name
(GenBank) DNA polymerase III, delta prime subunit
  KO
K02341  DNA polymerase III subunit delta' [EC:2.7.7.7]
Organism
saz  Shewanella amazonensis
Pathway
saz03030  DNA replication
saz03430  Mismatch repair
saz03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:saz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Sama_2042
   03430 Mismatch repair
    Sama_2042
   03440 Homologous recombination
    Sama_2042
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:saz03032]
    Sama_2042
   03400 DNA repair and recombination proteins [BR:saz03400]
    Sama_2042
Enzymes [BR:saz01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Sama_2042
DNA replication proteins [BR:saz03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Sama_2042
DNA repair and recombination proteins [BR:saz03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Sama_2042
SSDB
Motif
Pfam: DNA_pol3_delta2 AAA_16
Other DBs
NCBI-ProteinID: ABM00248
UniProt: A1S791
LinkDB
Position
complement(2478933..2479847)
AA seq 304 aa
MTAIPWLSQPLADFTALLTAGRMPHAVLVGVDEGLGASMLVNQLAQTALCTSPNVSGPCG
QCKSCQLFSAGNHPDFYPIKADGTQIKIDQIRELIARLSSTAQQGGRRVAIIEAAERMNT
ASANALLKTLEEPGANTLILLHSNTPARLLPTLQSRCQKLAFVAPNQRQIAAWLAQQGLG
TDALWCLPVVGGPIKLAEYLQNNYISVLENIRKDWRSSLSTGHLCASLKEIAEDQITDAL
KVLYVELMAYLAAAAKEDPLLASRLAGLAGEVMSVCHTLSTMPSVNYLALCQKIVSEYQR
IKEN
NT seq 915 nt   +upstreamnt  +downstreamnt
atgactgccattccctggctttcccagcctttggccgattttacggcgctgctaaccgcc
gggcgcatgccccatgcggtgttggtgggtgtggatgaagggctgggcgcatcgatgctg
gttaatcaacttgcccaaacagcactctgcacctctcccaatgtgtctggaccctgtggc
caatgtaaaagctgtcagttattcagtgcgggaaatcatccggatttttaccccatcaaa
gccgatgggactcaaattaaaatcgatcaaatccgtgaactcattgcccgtctttcgagc
accgcccagcaaggtggcaggcgggtagccatcattgaagcggctgagcgcatgaatacc
gcgtctgccaatgcgctgttgaaaaccctggaagagccaggtgccaacaccctgatttta
ttgcacagtaacacgcctgcacgcttgcttcccaccttgcagagtcgctgtcaaaagttg
gcgtttgtggcacctaaccaacgccagatcgcggcctggctggctcagcaggggcttggc
acagacgctctctggtgtttgcctgtggtgggtggccccatcaaattggcagagtacttg
caaaacaattacataagcgtacttgaaaacatcagaaaagattggcgaagcagtttgtcg
acgggccatctgtgtgctagcttgaaagaaattgccgaagaccaaataactgatgctctt
aaggttttgtacgttgaattgatggcctacctcgctgcagcagcaaaagaggatccgctt
ttggcatcacggctggcaggattggctggtgaagttatgagcgtttgtcatacgttaagt
actatgccgagcgtcaattatctggcactatgtcaaaagattgtttcagaatatcagaga
ataaaagaaaactag

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