Shewanella amazonensis: Sama_2060
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Entry
Sama_2060 CDS
T00445
Name
(GenBank) ribosomal large subunit pseudouridine synthase E
KO
K06181
23S rRNA pseudouridine2457 synthase [EC:
5.4.99.20
]
Organism
saz
Shewanella amazonensis
Brite
KEGG Orthology (KO) [BR:
saz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
saz03009
]
Sama_2060
Enzymes [BR:
saz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.20 23S rRNA pseudouridine2457 synthase
Sama_2060
Ribosome biogenesis [BR:
saz03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Sama_2060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
DUF5818
Motif
Other DBs
NCBI-ProteinID:
ABM00266
UniProt:
A1S7A9
LinkDB
All DBs
Position
2496625..2497263
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AA seq
212 aa
AA seq
DB search
MSEKIAERPSAKAAPRKPAVTQLVLFNKPFDVLCQFTDEAGRQTLKDFIPLPGVYAAGRL
DRDSEGLLLLTNDGQLQSRLTEPKKQTYKTYWVQVEGIPDESALDKLREGVELKDGPTLP
ARVRRIDAPQIWPRNPPVRERKSIPDCWLEIQICEGRNRQVRRMTAHIGYPTLRLVRAAI
GEIRLGHLGSGEYRKLNRDEISSLSTTLGIKR
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagaaaatcgcagaacggccaagcgccaaggctgcgccgcgcaagcccgcggtt
acccagctggtgctgttcaacaagcccttcgatgtgttgtgccagttcaccgatgaagcc
ggcaggcaaaccctgaaggactttattcctttgcccggcgtctacgccgcaggccggctc
gacagagacagtgaaggcctgttgctgctcaccaacgatggccagctgcaatcccgtctt
accgagccgaaaaagcagacctataaaacctattgggtgcaggtcgaaggcattcccgac
gaatcggcgctggataaactgcgtgagggtgttgagcttaaagatggccctactctgcct
gccagggtacgccgcatcgatgcgcctcaaatttggccgcgcaatccgccggtgcgggag
cgaaaaagcattccggactgttggctcgaaattcagatttgcgaaggtcgcaaccgccag
gttcggcgcatgacggcccacattggctatcccacgttaaggctggtgcgcgccgccata
ggtgagataagacttggacatcttggcagcggcgagtaccggaagcttaaccgggacgag
ataagtagcctgagcaccacccttggcataaagcgctag
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