Shewanella amazonensis: Sama_2173
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Entry
Sama_2173 CDS
T00445
Name
(GenBank) TPR domain protein
KO
K07114
Ca-activated chloride channel homolog
Organism
saz
Shewanella amazonensis
Brite
KEGG Orthology (KO) [BR:
saz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
saz02000
]
Sama_2173
Transporters [BR:
saz02000
]
Other transporters
Pores ion channels [TC:
1
]
Sama_2173
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA_2
TPR_2
TPR_1
TPR_11
TPR_7
TPR_16
TPR_12
TPR_8
TPR_14
ANAPC3
TPR_19
TPR_6
TPR_9
TPR_Slam
TPR_10
Motif
Other DBs
NCBI-ProteinID:
ABM00379
UniProt:
A1S7M2
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All DBs
Position
2627817..2629922
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AA seq
701 aa
AA seq
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MIHFIRPEWLLLFIPLLPVLWFLNRRQSVSSAWQGYIAPHLARVLLTEGEGRRSGVGLWW
LGVAWTVTTLALSGPAITKEPMPVFSAGAARVLVMDMSISMYATDLPPNRLTQARFRAID
LINQLSDGDTALVAYAGEAFVISPLTRDKATLLNLLPSLSPDIMPLLGSSPAAGISLARD
LLTQGGHPDGDIVLMTDGLDAVDVADVKRSLKGSPFRLTVYGFGTAQGAPMKLPNGSFVR
GNDDNLVLPKLDAELLAGLAQSERGIWQPSTLDGSDVSRLVKWLSREGEATDTELTGDTW
QDLGPYLALLLLLPALLSFRRGVLASMLLPAMLALSLSSQEAEASIWQTPDQQAMEAFRQ
KDFTTAANEFEREDWKAAAHYRAGDYEAALKGFEQDSSAAGLYNQGNALMQLGRYDEAAK
RYQKALEQQPDMEDAKRNAALAKALQEMQESQQEKQGQDGQSSSDDSQQQNSQSQQQNSQ
QSGTEQGQDSEQGAENNNGDQSQSSPQSGDEGSQSAQDGQSPGESQQQHESQQNESQQNE
SQQGDAAQETTSADDVANQGSSDSKSEDTNNSESDSGKGDGNNDAPMSADINAEQPKAPA
PNGESAVSSGSTEADEQTSPAEQAGSQTVAELAEGESEADAEQAQVGVIDPSLKESDLPP
EMLRALKSVNDDPSVLLRNKMQLEYQLRRARGEHRQEKEKW
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgatccactttatccggcctgaatggctgctcttgtttatcccgctgctgcctgtgctg
tggtttttaaaccgacgccaaagcgtatcctctgcctggcagggctatatcgcgccccac
ctcgccagagtgctgctaaccgagggcgaagggcgccgttcaggcgtcggtctgtggtgg
ctcggcgttgcctggactgtaaccaccctcgctctttccggtccggccatcaccaaggag
cccatgccagtgttctcagccggtgcggccagggtattggttatggatatgtccatttcc
atgtatgccaccgatttgccaccgaatcgattaactcaggccagatttcgcgccatcgac
ctgataaatcagctcagcgacggtgacacggcgctggtcgcctatgcgggggaggccttt
gtcatcagcccactcacccgcgataaggccaccctactcaatctgctgccctcactcagc
cccgacatcatgccgctgctgggctcatctcccgccgccggcattagccttgccagagat
ctgctgacccagggcggacatcccgacggcgacatagtgctgatgactgacggccttgat
gccgtggacgtggcagatgtgaagcggtcactgaaaggcagcccgtttcggttaacggtt
tatggttttggtactgcgcagggtgcgcccatgaagctgcccaatggcagtttcgtgaga
ggcaatgacgacaatctggtgctgcccaagctggacgccgagcttttagccggattggcc
cagtcagagcgcggcatttggcagccatcaaccctggatggctctgatgtcagtcgcctc
gttaagtggttatcgcgggaaggcgaagccactgatacagagctcaccggcgacacctgg
caggatttggggccatatctcgccctgttgctgctgttgcctgccctgctgagttttcgc
cggggcgtgctggcgtcaatgctgttgccggcgatgctggcactttccctgagcagccaa
gaagccgaggccagtatctggcaaaccccggaccaacaggccatggaggcatttcggcag
aaagactttaccaccgccgccaatgaattcgagcgggaagattggaaagctgccgcccat
taccgggccggtgactatgaagcggcgctgaagggctttgagcaagatagcagtgctgcg
ggtctttataatcagggcaatgccttgatgcagctgggtcgttacgatgaagcggcgaag
cgctatcaaaaagcacttgagcaacaaccggatatggaagatgccaagcgcaatgctgcc
ctcgccaaggcgctccaggagatgcaagaatctcagcaagaaaaacaaggtcaggatgga
cagtcctcatctgacgactcacagcagcaaaactctcagtcacagcagcaaaactcgcag
caatctggcacagagcaaggccaggactcggagcaaggcgctgaaaacaacaatggagat
cagtcgcaaagcagcccacagtcaggagacgagggctcgcaaagtgcccaggacggacaa
agccccggcgaatcacagcaacaacacgaaagccagcaaaacgaaagccagcaaaacgaa
agtcagcaaggcgatgccgcgcaggagacaacctccgctgacgacgtggcaaaccaaggc
agctctgattcaaaaagcgaagacacaaataacagcgagtcagacagcggcaagggcgat
ggcaataacgacgcgcccatgagtgccgatatcaacgcagagcagccaaaagcgccagct
cccaacggtgagtctgccgtgagcagtggcagcactgaggccgatgagcaaaccagtcca
gccgagcaggctggcagccagacagtcgcagagctcgccgagggcgagtcagaagcggat
gcagagcaagctcaggtgggcgtgatagatcccagcctgaaagaatcagatctgccgccg
gagatgctgagggcgctaaaatccgtaaacgacgacccctctgtactgcttcgcaataag
atgcaattggaatatcaacttcgccgcgcccgcggtgaacacagacaggaaaaagaaaag
tggtaa
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