Shewanella amazonensis: Sama_2205
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Entry
Sama_2205 CDS
T00445
Name
(GenBank) DNA-3-methyladenine glycosylase II / DNA-O6-methylguanine--protein-cysteine S-methyltransferase / Transcriptional regulator Ada
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
saz
Shewanella amazonensis
Pathway
saz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
saz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Sama_2205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
saz03000
]
Sama_2205
03400 DNA repair and recombination proteins [BR:
saz03400
]
Sama_2205
Enzymes [BR:
saz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
Sama_2205
Transcription factors [BR:
saz03000
]
Prokaryotic type
Helix-turn-helix
AraC family
Sama_2205
DNA repair and recombination proteins [BR:
saz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Sama_2205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ada_Zn_binding
AlkA_N
HTH_18
HTH_AraC
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
ABM00411
UniProt:
A1S7Q4
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All DBs
Position
complement(2662444..2663895)
Genome browser
AA seq
483 aa
AA seq
DB search
MFQQLPSAEICQRARMSRDARFDGLFFTGVFSTGIYCRPICPAAAPKEENVRYFASAQAA
AAAGLRPCLRCRPESAPGSSPWRGTATTLFRAMALIDAGALNATDDETYQPAQTQAQAME
SLAERVGVGSRYLRKLFGEQLGMSPKAYGDYRRLLLAKALLHQTSLPITDVAFAAGFGSV
RRFNEVFRERLSLTPSAIRADSKVKDSGICLQLSFRPPYDFMRLRAFFMARAIPGAEWFF
NDAGEPCYGRTLMVAGDAGWFEACLLAGKNALAVSIFPGGRVSALSQWLAEIKRVLDIDA
NLSLIHEHIQGHMPEGVVLNTMTLPGAGSFFEAACRAVLGQQVSLVQATRLLGLLTAETT
PEVELGGRRCRVFPTAEQVASATLESLKMPGSRKNALRDMAALFSRDPVPDDATLLAVKG
IGPWTVSYARMRGLSDPDVLLVGDLVVKQKLTAMGWAKVPDRLKSDVSPWGSYLTLALWH
TEI
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
gtgttccaacaactgccctcagcggaaatttgccaacgggcgcgcatgagccgcgacgcc
cgcttcgacggcctgttttttaccggcgtgttttccactggcatctattgccggcctatc
tgtccggccgccgctcccaaggaggagaatgtccgctatttcgcctctgctcaggcggct
gcagcagcgggtttacgcccttgtctgaggtgtcgtcccgagtcggcgcccggctcatcg
ccctggcgtggtactgcgacgactctgttcagggccatggcgctcatagatgccggggca
ttaaatgcaactgacgatgaaacgtaccaaccggctcaaacccaggctcaggcgatggaa
agcctcgccgagagggtaggagttggcagccggtatcttcgcaagctatttggtgagcag
ttgggtatgtcgcccaaagcctacggtgactatcgccgcctgctgctggccaaagcgctc
ttacatcaaacgtcactgcccattaccgatgtggcttttgcggctggatttggatcggtg
cggcgattcaacgaagtgttccgtgagcgactctcgttaacgccaagcgccatccgtgcc
gacagcaaggtgaaggacagtggcatctgtctgcagttaagtttcaggcccccttacgat
tttatgcggctcagagccttttttatggcgcgggccattcccggagccgagtggtttttt
aacgatgcaggtgagccctgttacggccgtaccctcatggttgcgggcgatgcgggctgg
tttgaggcttgtttgctggcgggtaaaaatgccctggcggttagtatctttccgggcggg
cgagtcagtgcgctcagccaatggcttgctgaaatcaagcgggtactggatatcgacgcc
aacctttccctcattcatgaacatatccagggccacatgcccgagggtgtggtgctcaat
accatgacactgccgggggcaggcagtttttttgaggccgcgtgccgtgcggttttgggg
caacaggtaagccttgtgcaggcaacaaggctcttgggtctgctgacagcagaaaccacg
cctgaagtcgagctgggaggcaggcgttgccgggtatttcccaccgctgaacaagtagcg
tcggctacgctcgaaagcctgaaaatgccgggaagccggaaaaatgcactgcgggacatg
gcggcgctctttagccgtgatcccgtgcccgatgatgccactttgctcgctgtaaaagga
ataggcccctggaccgtgagttatgcccgcatgcggggattgtcggacccggatgtgttg
ctggtcggtgatttggttgtaaagcaaaaacttaccgccatgggttgggctaaggtgcct
gataggctaaaaagtgacgtttctccctggggcagttatctcaccctggcgctgtggcac
acagaaatctaa
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