Shewanella amazonensis: Sama_2237
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Entry
Sama_2237 CDS
T00445
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
saz
Shewanella amazonensis
Pathway
saz00521
Streptomycin biosynthesis
saz00523
Polyketide sugar unit biosynthesis
saz00541
Biosynthesis of various nucleotide sugars
saz01100
Metabolic pathways
saz01110
Biosynthesis of secondary metabolites
saz01250
Biosynthesis of nucleotide sugars
Module
saz_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
saz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
Sama_2237
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
Sama_2237
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
Sama_2237
Enzymes [BR:
saz01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
Sama_2237
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
ABM00443
UniProt:
A1S7T6
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Position
complement(2701549..2702079)
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AA seq
176 aa
AA seq
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MQVLTTAINEVKLIIPSVFEDERGYFFESWQQQRFAELVAPVTFVQDNQSLSKRGTLRGL
HWQEAHPQDKLISVLSGTIFDVAVDIRPESPTYGKWVGETLSAENHRQLFIPKGFAHGFY
VLSESAIVSYKCSDFYHPEDERSIRWDDPSLAIQWPIEGLPLLSAKDAMAPLFTPR
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtgttaaccactgcaatcaatgaagtaaaacttattatccccagtgtatttgag
gatgaacggggatactttttcgaaagctggcagcagcagcgatttgccgagctggtcgcg
ccggtcacctttgtgcaggacaatcaatccttgtccaaaaggggcaccttaagggggttg
cactggcaggaagcgcatccgcaggacaagcttatttcagtgctgtcgggcactatattt
gatgtggccgtcgatattcgtcccgaatcgcccacctatggcaaatgggtgggggaaacg
ctctctgcagaaaatcacaggcaactctttatccccaaaggttttgcccacggtttttat
gtgctgtcagaaagtgccatcgtcagttacaaatgcagcgacttttatcatcccgaggac
gagcgcagtattcggtgggatgacccatccctcgcaattcaatggcctattgaagggcta
cctttactttcagccaaagacgccatggcgccgctttttacacctcgttag
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