Shewanella amazonensis: Sama_2299
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Entry
Sama_2299 CDS
T00445
Name
(GenBank) two component, sigma54 specific, transcriptional regulator, Fis family
KO
K10943
two-component system, response regulator FlrC
Organism
saz
Shewanella amazonensis
Pathway
saz02020
Two-component system
saz02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
saz00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Sama_2299
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Sama_2299
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
saz02022
]
Sama_2299
02035 Bacterial motility proteins [BR:
saz02035
]
Sama_2299
Two-component system [BR:
saz02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
Sama_2299
Bacterial motility proteins [BR:
saz02035
]
Flagellar system
Flagellar assembly proteins
Others
Sama_2299
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA_2
AAA_16
HTH_30
Mg_chelatase
HTH_24
AAA
AAA_19
MerR
AAA_3
AAA_14
HTH_50
nSTAND3
HTH_11
DUF2089
Motif
Other DBs
NCBI-ProteinID:
ABM00505
UniProt:
A1S7Z8
LinkDB
All DBs
Position
complement(2764199..2765539)
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AA seq
446 aa
AA seq
DB search
MPEGRLLLVEDDASLREALLDTLMLAQFDCVALPSAEEAILALKESRFDMVISDVQMEGI
GGMGLLAYLRQYHPKVPLLLMTAFATIDSAVSAIKLGAVDYLAKPFSPEVLLNQVSRYMP
AQADTGAPVVADERSQALLALAGRVAKSEASVMILGPSGSGKEVLARYIHKQSLRSDGPF
VAINCAAIPENMLEATLFGYEKGAFTGAYQACPGKFEQAQGGTLLLDEISEMDLGLQAKL
LRVLQEREVERLGGRKTIKLDVRVLATSNRELKAMAERGDFREDLYYRINVFPLTWPALN
QRPKDILPLARHLLARHAERLGTEVPEFDEAACRRLLAHRWPGNVRELDNVVQRALILSA
GVKIGVQDIIIDAMDVTQITQEETAVKAEPEGLGDELKAQEHVIILETLSQCRGSRKLVA
ERLGISARTLRYKMARMREMGIQLPA
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaaggcagactgctacttgtcgaggacgatgcgtctctgcgtgaggcgctgctc
gacaccctgatgctggcgcagtttgactgtgtggcgcttcccagcgctgaagaagccatt
cttgcgttgaaagaatcacgttttgacatggtcatcagcgatgtgcaaatggaaggcatc
ggcggcatggggcttttggcctatttgcggcagtatcatcccaaggtcccgttattgctg
atgacggccttcgccaccatagacagtgccgtgagtgccatcaaacttggtgcggtggat
tatcttgccaagccgttttcacccgaagtactgcttaaccaggtcagtcgctacatgccc
gcgcaagccgatacgggcgcacccgtggtggccgatgagcgcagtcaggcgctgcttgcc
cttgccggacgggtagccaaatccgaggcgtctgtgatgatcctcgggccttctggttcg
ggtaaggaagtgctggcccgctatatccataagcaaagtttgcgctcagatggccccttc
gtggccatcaactgcgctgccattccggaaaatatgctcgaagccacactgttcggctat
gaaaagggcgccttcaccggtgcctatcaggcctgccccggaaaattcgagcaggctcag
ggaggcaccctgctgctggatgaaatctccgaaatggatctgggattacaggccaagttg
ttgcgggtattgcaggagcgggaagttgagcgtctcggtggccgtaaaactattaagctg
gatgtgcgtgtgcttgccacctccaaccgtgagctcaaggctatggcggagcggggggat
ttccgtgaagatctttattaccgtatcaacgtattcccactgacctggccggctctgaac
cagcgtccgaaagacattttgccacttgcgcggcatttgctggcacgccatgcagagcgt
ctgggcacagaagtacccgaatttgacgaagcggcctgtcgcagattactggcacatcgc
tggccggggaatgtcagagaactcgataatgtggtgcagcgggcgttgatcctgtccgcc
ggcgttaagataggcgtgcaggacatcattatcgacgccatggacgttactcaaatcact
caggaagagacagccgtcaaggccgagcccgaaggattgggagatgagctcaaggcccag
gagcatgtgataatccttgagaccctgagccagtgccgcggcagtcgcaaactggtggct
gagcgtctggggatcagtgccaggaccctgaggtacaagatggcccgtatgcgggaaatg
ggtattcagctacctgcctga
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