Shewanella amazonensis: Sama_2380
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Entry
Sama_2380 CDS
T00445
Name
(GenBank) isocitrate lyase
KO
K01637
isocitrate/methylisocitrate lyase [EC:
4.1.3.1
4.1.3.30
]
Organism
saz
Shewanella amazonensis
Pathway
saz00630
Glyoxylate and dicarboxylate metabolism
saz00640
Propanoate metabolism
saz01100
Metabolic pathways
saz01110
Biosynthesis of secondary metabolites
saz01120
Microbial metabolism in diverse environments
saz01200
Carbon metabolism
Module
saz_M00012
Glyoxylate cycle
saz_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
saz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Sama_2380
00640 Propanoate metabolism
Sama_2380
Enzymes [BR:
saz01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.1 isocitrate lyase
Sama_2380
4.1.3.30 methylisocitrate lyase
Sama_2380
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Gene cluster
GFIT
Motif
Pfam:
ICL
PEP_mutase
Androglobin_IV
Motif
Other DBs
NCBI-ProteinID:
ABM00585
UniProt:
A1S878
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Position
complement(2858428..2859747)
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AA seq
439 aa
AA seq
DB search
MSKYISRQEQIDALKKDWAENPRWKGVRRPYTAEEVVSLRGSFVPENTVAQRGAAKLWDL
VNGGAKKGYVNSLGALTGGQAVQQAKAGIEAIYLSGWQVAADANLAGTMYPDQSLYPANS
VPAVVGRINNSFRRADQIQWSNGVGPEDDKFVDYFLPIVADAEAGFGGVLNAYELMKSMI
DAGAAGVHFEDQLASVKKCGHMGGKVLVPTQEAVQKLVAARLAADVSGVETLVIARTDAN
AADLLTSDCDPYDSDFITGERTSEGFYRVRAGLDQAIARGLAYAPYADLIWCETAKPDLE
EARRFAEAIHAKYPDQLLAYNCSPSFNWKKNLDDATIAKFQQALSDMGYKYQFITLAGIH
NMWFNMFDLAYDYARGEGMKHYVEKVQEAEFAAASKGYTFVAHQQEVGTGYFDKMTNIIQ
GGASSVTALTGSTEEEQFH
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagtacatcagccgccaggaacaaattgacgcactgaaaaaggactgggccgaa
aacccacgctggaaaggtgtgcgccgtccttatactgccgaagaagtggtttcgctgcgc
ggctcttttgtaccggagaatacagtggcccagcgcggcgcagccaaactgtgggacctg
gtcaacggtggtgccaaaaaaggttatgtaaactccctcggtgccctgaccggtggtcag
gcggtacagcaggccaaggccggcattgaagctatctatttgtctggctggcaggtagcc
gccgatgccaacctggccggtaccatgtacccagaccaatctctgtaccccgccaactct
gtgcctgctgtggttggtcgtatcaataactcattccgccgcgccgaccagatccaatgg
agcaacggcgtaggtccggaagatgacaagttcgttgattacttcctgccaatcgtggcg
gatgccgaagccggctttggtggtgtactcaatgcttacgagttgatgaagtctatgatt
gatgccggtgccgccggtgtgcactttgaagatcagctggcatcggtaaagaaatgcggt
cacatgggcggcaaagtgttggtgcccactcaggaagcggtacaaaaactggttgcggcc
cgtttggcggctgacgtatctggcgtagagactctggttattgcccgtaccgacgccaat
gctgccgatctgctgacctcggattgcgacccatacgacagcgacttcatcacaggtgag
cgtaccagcgaaggtttctaccgtgtccgtgccggtctggaccaggccatcgcccgtggt
ttggcttacgctccatacgccgacctcatctggtgtgaaactgccaagccggacctggaa
gaagcccgccgcttcgccgaggccatccatgccaagtacccggatcagctgctggcctat
aactgctcaccttctttcaactggaagaagaatctggacgacgccactatcgccaagttc
cagcaggccttgtctgacatgggctacaagtatcagttcatcaccctggccggtatccac
aatatgtggttcaacatgttcgacctggcgtacgactacgcccgcggtgaaggcatgaag
cactatgtagagaaggtgcaggaagccgagtttgctgccgccagtaagggatataccttt
gtggcgcaccagcaggaagtgggcaccggctacttcgacaagatgaccaatatcattcag
ggcggtgcctcttctgtgactgcactgaccggttccactgaggaagaacagttccactga
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