Shewanella amazonensis: Sama_2448
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Entry
Sama_2448 CDS
T00445
Name
(GenBank) diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
Organism
saz
Shewanella amazonensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_3
PAS_9
5TM-5TMR_LYT
PAS
PAS_4
PAS_8
PAS_11
PAS_7
Diguanyl_cycl_sensor
Motif
Other DBs
NCBI-ProteinID:
ABM00653
UniProt:
A1S8E6
LinkDB
All DBs
Position
complement(2946576..2949686)
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AA seq
1036 aa
AA seq
DB search
MTQGIFFPLVQNAALLLALVYLYDAIPWLKQQRIRWVWHIMLGLVIGAIGMTIMSARYEF
AEGIYFDTRGVLLSVSGLYFGAVPTLIASAMMAIYRYGMGGPAMVAGIAGIAFAAAMGIL
WRIPWQKNLIEVSTGSLLLLGMLVNIGSLLCFFIMPFDLAWELVSTIGTTVMLVCPLATL
LLARLLARRLEIERDEKIKLQDDFLFRSQFNVGNIGIAITSVDKRWIKVNPRLCQMLKYS
EKELLSMNWEQMSHEEDISVDLAHFNQMLAGAIDQYELNKRFYAKDGSIVYTHMTVACKR
IAGKVQLVIAGFMDISAQTQSEMSVRASREQLSLVLASAELGFWDWDLNNDVIDRNERCA
DMLGCSVDEMRHNHRIWMDSIHPDDRMAVLKSIDRHLQGHTDSHNVEYRIIRKNGETLWV
RDTGRVMQKDSSGKAIRMCGVHLDITQVRHNQEQMELAASVYNNSSEAMSVMDHKGNIIT
VNAAFADITGYSPKEVLGHHISQFYCPRNKPAFYDEVNQAIKETGRWQGEMWQQHKNGKE
YLIWLTVNTIYDAYQRPHRRVALFSDITEKKAQEQLIWQQANYDPLTKLPNRRMLLDYLD
REISLASRQNVRFALLFLDLDFFKEVNDTLGHDMGDKLLIECADRIKACIRDSDVVARLG
GDEFTVLIRDIHDVGGVERAASNILKAIAEPFQLGPDSAYISVSIGITLFPEDASTREAL
LKNADQAMYAAKEQGRNRFNYFTPSMQEQAKYRMRLIQDLRIAIEHQQFNLVYQPIVHLQ
SGKVHKAEALLRWHHPERGYISPTEFIPVAEDTGLIMEIGSWVFEHAARQCRDWHHEFGT
TIQLSVNKSPVQFRDEGENFERWVALLEELELTHGGICIEITEGLLLDASSGVAEKLLTY
RDAGIQVSLDDFGTGYSSLAYLKKFDIDYLKIDQSFTRNLENDASDRTLCEAIIVMAQKL
GMKVIAEGVETAKQQEILKAMGCDYAQGYLYSAPVSREEFETRFLKGDPNQAPQPDKPET
RKAKTRAKAPQKAQDA
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atgacccagggtattttctttccgctggtccaaaatgccgcgctgctattggcgctggtg
tacctttatgacgccatcccctggctgaaacagcagcggatccggtgggtttggcacatc
atgctgggattggtgattggcgccatcggcatgaccatcatgtctgcccgctacgaattt
gccgaggggatctactttgatacccgaggtgtgctgctcagtgtcagcggtctctatttc
ggcgcagttcccaccctgattgcctcagccatgatggccatctatcgctacggtatgggc
ggtccggccatggtggccggtattgccggtattgcgttcgctgctgccatggggatcctg
tggcgcatcccctggcagaaaaatctgatagaggtaagcacagggtctttgttgctgctt
ggcatgctggttaatatcggcagcttgctgtgcttcttcattatgccctttgatctcgcc
tgggagctggtgtccaccataggtacaaccgtcatgctggtatgccccttggcgaccttg
ttgctcgcgaggttattggcccggcgcctggagattgaacgggacgaaaaaataaagctg
caggatgatttcctgtttcgctcccaattcaatgtcggcaacatcggcattgccatcacc
tcggtcgacaaacgctggattaaggttaaccccaggctgtgccagatgcttaagtattcc
gaaaaagagctgctgtcgatgaactgggagcagatgtcccacgaagaggatatctcggtg
gatcttgcccatttcaatcagatgctggcgggggcaatagatcagtacgaactcaataag
cgcttctatgccaaggatggcagcatagtgtatacccacatgacggtggcctgtaagcgc
atcgctggcaaggtacagctggtgattgccgggtttatggatatctcagctcaaacccaa
tctgaaatgtcggtgcgcgccagtcgggaacagttatccctggtgcttgcctctgccgaa
ctgggattctgggattgggatttgaacaatgacgtgattgatcgcaacgaacgttgtgca
gacatgctgggatgctcggtggacgaaatgcgtcataaccacaggatttggatggattcc
attcatccggacgatcgcatggcggtgcttaagtccattgacaggcatttgcagggccac
accgacagtcataacgtggaatatcgcattattcgcaaaaacggcgagacgctctgggtt
cgggacacggggcgggtaatgcaaaaagacagcagtggcaaggccatcagaatgtgcggt
gtgcatctggatattacccaggttcgccacaaccaggagcagatggagcttgcggcctcg
gtttataacaactccagtgaagccatgagcgtgatggaccacaaaggcaacatcatcacg
gtcaacgccgcgtttgcggatattaccggttattcgcccaaagaggtgctggggcatcat
atcagccaattttattgcccccgaaacaagccggctttttatgatgaggtcaaccaggcc
atcaaagaaaccggtcgttggcagggggaaatgtggcaacagcacaaaaacggcaaggaa
tacctcatttggctcaccgtgaataccatttacgatgcctatcaaaggccccatcgccgg
gtggcactattctctgatatcaccgagaaaaaagcccaggagcagcttatttggcagcag
gcaaactacgaccccctcaccaagttgcccaacaggcgcatgttgctggattacctcgac
cgggagatttccctggcgtcccgtcagaatgtgcgctttgcgctgctgtttttggatttg
gattttttcaaagaggtcaacgacacccttggccatgatatgggggacaaactgcttatt
gaatgcgctgacaggatcaaagcctgtatccgcgactcggatgtggtggcgcgtcttggt
ggtgacgaatttactgtattgatccgtgatatccacgatgtgggtggggtagagcgggcg
gccagtaatattctcaaggccatcgccgagccatttcagctggggccggattcggcctac
atcagcgtcagtatcggcattaccctgttccccgaggatgccagtacccgagaggcgctg
ctgaaaaatgccgatcaggccatgtatgcggccaaggagcaggggcgtaatcgcttcaat
tacttcacgccatccatgcaggagcaggccaagtaccggatgcggcttatccaggattta
cgcattgccattgagcatcagcagtttaatctggtgtatcagcccatagtgcatctgcaa
agcggcaaggtgcacaaggccgaagccctgctgcgctggcatcatcctgagcggggatat
atctctccgaccgaatttattccggttgctgaagacacagggctgattatggaaataggc
tcctgggtatttgagcatgcggcgcggcaatgccgcgattggcaccatgaatttggcaca
accattcaactgtcggtgaacaagtcgccggtgcagtttcgtgatgaaggggaaaacttt
gagcgctgggttgccctgctggaggagctcgaattaacccacggtggcatctgcatcgaa
attaccgaaggtttgttattggatgcctcctccggggtggctgaaaaactgctcacctac
cgcgacgctggcattcaggtgtctttggatgatttcggcaccggctattcgtcgctggcg
tacctgaaaaaatttgatatcgattaccttaaaattgaccagtcctttacccgaaatctg
gaaaacgacgccagtgacagaaccctgtgtgaggccattattgtgatggcccaaaagctg
gggatgaaggtgattgccgaaggggttgaaaccgcaaaacagcaagagatcctcaaggct
atgggctgtgactatgcccagggctacctttattctgcgcctgtctcccgggaggaattc
gaaacacgttttctgaaaggggatcccaatcaggcgccgcagcccgataagcctgaaacc
cggaaggccaagaccagggccaaggcaccccaaaaggcacaggatgcatga
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