Shewanella amazonensis: Sama_2490
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Entry
Sama_2490 CDS
T00445
Name
(GenBank) A/G-specific DNA-adenine glycosylase
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
saz
Shewanella amazonensis
Pathway
saz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
saz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Sama_2490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
saz03400
]
Sama_2490
Enzymes [BR:
saz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
Sama_2490
DNA repair and recombination proteins [BR:
saz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Sama_2490
Prokaryotic type
Sama_2490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
NUDIX_4
HHH
EndIII_4Fe-2S
Motif
Other DBs
NCBI-ProteinID:
ABM00694
UniProt:
A1S8I7
LinkDB
All DBs
Position
2992315..2993421
Genome browser
AA seq
368 aa
AA seq
DB search
MSEQTARIPFGKRIVLWYDKHGRKSLPWQQNKTPYKVWVSEIMLQQTQVATVIPYFERFM
ASFPTVNDLANAHEDEVLHHWTGLGYYARARNLHKAAQLIRDEHGGEFPTEFDAVLALPG
IGRSTAGAVLSLSLGQHHPILDGNVKRVLARHGAIEGWPGEKRVDTALWQLTEALTPKED
IQKYNQAMMDMGANICTRSRPKCGECPVAIDCKAQLAGRQGEFPGKKPKKTIPAREGWML
ILQQANTVKLIKRPPSGIWGGLWCFPQFDSKQALHAFVEANGLDAENLTLLDGFRHTFSH
FHLDIQPVKLRLGSTQTEALIMEDNLSLWYNLLQGENLGLAAATERILASLVSELKQESG
GSAAAHKE
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagcaaacagcccgcattccttttggaaagcgtatcgtcctgtggtacgacaaa
cacggccgcaagagcctgccatggcagcaaaacaagacgccttataaggtatgggtgtcg
gaaatcatgctgcagcaaacccaggtggctaccgttatcccctacttcgagcgctttatg
gcaagcttccccacggtgaacgaccttgccaacgcccatgaagatgaagtgctgcaccac
tggaccggccttggctactatgcccgtgcccgcaacctgcacaaggccgcacagctcatc
cgcgacgagcacggcggcgagttcccaaccgagttcgatgccgtgctggcactgcccggc
attggccgctccacggcaggtgccgtgttgtcattatctttagggcagcatcatcctatt
ctcgatggcaatgtaaaaagagtgctggcgcgacacggcgccatcgaaggctggcccggc
gagaaacgggtcgataccgccctgtggcaactcaccgaagcgctaacccccaaagaagac
atacaaaagtacaatcaggccatgatggatatgggtgccaatatctgcacccgcagccgc
cccaagtgtggtgagtgccccgttgccatcgactgcaaggcgcagcttgccggccgtcag
ggtgagttccccggtaaaaagcccaaaaagaccattcccgcccgggaaggctggatgctg
attctgcagcaagcaaacaccgtcaagcttatcaagcggccacccagtggcatctggggc
ggcctctggtgcttcccccaatttgatagcaagcaagcgctccatgcctttgtcgaagcc
aatggcttagatgcagaaaatctcaccctgctggatggctttcgtcacacattcagccac
ttccatctggatattcagccggtcaaactgcgccttggcagcacacagacagaggcgctt
atcatggaagataacctgagtctctggtataacctcctccaaggcgaaaatcttgggctt
gccgccgccaccgagcgaattctggcaagccttgtaagcgaacttaagcaagaatccggc
ggcagcgctgccgcccacaaggagtaa
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