Shewanella amazonensis: Sama_2497
Help
Entry
Sama_2497 CDS
T00445
Name
(GenBank) conserved hypothetical protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
saz
Shewanella amazonensis
Brite
KEGG Orthology (KO) [BR:
saz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
saz03400
]
Sama_2497
Enzymes [BR:
saz01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
Sama_2497
DNA repair and recombination proteins [BR:
saz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
Sama_2497
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
DUF346
Motif
Other DBs
NCBI-ProteinID:
ABM00700
UniProt:
A1S8J3
LinkDB
All DBs
Position
complement(2997619..2999328)
Genome browser
AA seq
569 aa
AA seq
DB search
MSQNQMSLQSPEGDFQFHTLRLLLGDQLGSNHSWFSQHDDGVLYLIAELKQESRYVTHHV
QKVCAFFAAMADFAKSLTASGHRVLHLTLDDTAEFANLPALLCHVLQITGARRFEYQRPD
EYRLLLQLGTFAVPGVQVEMVDSEHFLLPFDEISMLFPKGKHILMESFYRRMRKRFDILM
DGARPMGGQWNFDGSNRNKLKAADIKNLPEPLLFANDISEIVLRLQRHGIVTIGNLEPQA
TQAITKGCKASYVSGDLFDAMPDLEHVSKTPMNNLLWPINREQSLALLAHFCRHCLPLFG
RFQDAMTANHASAWSLYHSRLSFSINSKLLHPGEVIKAAISAYEASCIDGANGDVDMAQV
EGFVRQILGWREYVRGVYWANMPDYGMLNALGAENRLPHYFWSGDTRMNCMRHAIGQSLD
YAYAHHIQRLMITGNFCLLTDIDPKQVDDWYLGIYVDAIEWVEMPNTRGMALFADGGIVG
TKPYAASGAYINKMSDYCEGCHYDIKAKSGALSCPFNSLYWRFINKHAERLGANHRLGMI
FSSWYKMPESQRTAILATAEQYIVDLERL
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgagccagaaccagatgtcactccaaagtcccgagggcgattttcagttccatacactt
cgattactccttggcgatcagctcggcagcaaccactcctggttcagtcagcacgatgat
ggtgtgctctatcttatcgccgagctgaagcaggaaagccgctacgttacccaccatgtt
caaaaggtgtgcgcctttttcgctgccatggcggattttgccaaaagccttacggcctcg
ggccatcgggtgctgcaccttactctggacgacaccgccgaatttgccaatctgccagct
ttgctttgccatgttctacaaataactggcgccaggcgctttgaatatcagcgtccggac
gagtatcggctgcttttgcaacttggcacctttgctgtgcccggggtgcaagttgagatg
gtggacagcgagcactttttactgccctttgatgagataagtatgctctttcccaaaggc
aaacatatcctgatggaaagcttttatcggcggatgcgaaagcgttttgacattctgatg
gatggcgccaggccaatgggtggccagtggaacttcgatggcagtaatcgcaataagtta
aaagcggccgatatcaaaaacttgccggaacctttgctgtttgcaaatgatatcagtgag
atagttctgcgcctgcagcgccatggcatcgtcaccatcggtaatcttgagccgcaagcg
acccaggccatcaccaagggatgcaaggcgtcatacgtcagtggtgacctttttgatgct
atgcctgacctcgaacatgtttcgaaaacgccaatgaacaacctgctttggcccatcaat
cgagagcagagtctggcgctgctggcccatttttgccgtcactgcctgccgctttttggc
cgctttcaggatgcgatgacggcaaaccacgcgtctgcctggagcctataccacagccgc
ttgtccttttcgataaacagcaaattgctgcacccgggcgaggtgataaaggcggccatc
agcgcctatgaggccagttgcatcgatggagcaaacggtgatgttgatatggcgcaggtc
gaaggctttgtacggcaaattcttggctggcgggaatatgtgcgcggcgtctattgggcc
aatatgccggactatggaatgcttaacgccctgggcgctgaaaaccggctgccgcactat
ttctggagtggcgatacccgcatgaactgtatgcgccacgccatagggcagtcgctggat
tatgcctatgcccatcatattcaaaggcttatgatcaccggcaatttttgcctgctcacc
gacatcgacccgaagcaagtagatgactggtaccttggcatctatgtggatgctatcgag
tgggtcgaaatgcccaacacccggggcatggcgctgtttgccgatggtggcattgtgggc
accaagccctatgccgccagcggcgcctatatcaacaagatgagtgactactgcgagggc
tgccattacgacatcaaggcgaaaagcggcgcgctttcgtgcccctttaacagcctgtat
tggcgctttataaataaacatgccgagcgccttggggccaatcatcggctggggatgatt
ttctcaagttggtacaaaatgccagagtcgcagcgcacagcgattctcgctactgccgag
cagtatattgtcgatttggagcggctgtga
DBGET
integrated database retrieval system
