Shewanella amazonensis: Sama_2618
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Entry
Sama_2618 CDS
T00445
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
saz
Shewanella amazonensis
Brite
KEGG Orthology (KO) [BR:
saz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
saz02000
]
Sama_2618
Transporters [BR:
saz02000
]
Other transporters
Pores ion channels [TC:
1
]
Sama_2618
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
ABM00821
UniProt:
A1S8W4
LinkDB
All DBs
Position
complement(3134018..3136567)
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AA seq
849 aa
AA seq
DB search
MKAQKWILSSCALAVALALPSVAVAAEDGAKVERLEVTGSRIKRTDIEGPSPIQSIGKDD
IANMGFDNLQQLLEKMPANGAGAFSTRGNSQDSTANGSASISLRGLGPDATLVLINGRRV
AISSFAEGVSNSFVDINNIPVSAIERIDILKDGASAIYGSDAIAGVVNIVLKKDIEGIEV
NLGYGGATGPHYDEKTANLVWGTKGDKGTASIILDYFKNSTLSADEMGRFGTANQEPYGG
DDNRSSRGYPGYFYVDGVKTPDPDCPADRLTGSGSCLFDYGPYNLTIPAAERVGAIGQFE
YFFDNDVTAFLEFAVQHNTSEAGGAATPLDESAGLTVPGTHPDNPWGKDILIGRYRPVDA
GARRWDIESDSMRLVAGLRGTLNEWDWEVAAQKGRQEQTQTGDRSQGWVRVDYLQREIDA
GRYNPFGAAVNSPDVIDAITTSLVRQGVSHMTAYNASITGQAFTLAERDVMMAAGVEYRE
EDVSDVPDEQFQRGLIFGTEAVSANAERDQWAAYVEFSIPVTDNFELQLAGRYDNYSDFG
TTTNPKVAFQWGITDEITARGSWATGFRAPSLAQIGLGPSQESLFLDDYYFCQANGLDAS
ECENLDQNFLFSGNKELEAEESESWNVGMIYAPNQSFDLSLDWYNITQDNKIDKLEPQDV
YDANCGSQNSPICQRLAPVGADSLGTIDKILSSFVNISSQEVQGIDVSSHYTLATDGYGD
VKFGLEYSYLMDFEKGDKDWTGKYRFPEHRWLGTTNWTKDDLSVNLNLSYIGEFADYNET
RNVDAQLLVDMSASYRFSETLKWTIGMNNVLDEEPPFAIGDGDGDLYGYVMATHNPMGRY
AYIKLNINF
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atgaaagctcaaaaatggattctgagcagttgtgcgttagccgttgccttggcgctgcct
tctgttgctgtcgccgcagaagatggtgcaaaagttgagcgtctggaagtcacaggctct
cgcatcaagcgaactgacatagaaggcccatcacccatccaatccattggcaaagacgac
attgccaatatgggttttgataacctgcaacaattactcgagaaaatgcctgccaacggc
gccggtgctttttctacccggggtaacagtcaggattctaccgctaacggctctgcctct
atcagcctcaggggccttggtccggatgcgaccctggtactcattaacggtcgccgcgta
gccatcagctcatttgccgaaggcgtgagcaactccttcgttgacattaacaacatcccg
gtttcggccattgagcgcatcgatattctgaaagacggcgcctctgcaatttacggctcc
gacgccattgccggtgtagtgaacattgttctgaagaaggatatcgaaggcatcgaagtc
aacctcggttatggtggcgctacaggcccccattatgacgaaaaaacggcgaacctggtt
tggggtaccaagggtgataaaggcactgcctctatcattctcgactactttaagaactct
accctcagcgccgatgaaatgggccgtttcggtaccgcgaaccaagagccctatggcggc
gatgacaaccgttcctcccgtggttaccctggttatttctatgtcgatggcgtgaaaact
ccggaccccgattgtcctgccgatcgcctcacgggtagtggcagttgtttgttcgactac
ggtccttataacctcaccatccctgccgctgagcgtgtaggtgccataggtcaattcgag
tatttcttcgataatgatgtgactgcttttctggaattcgctgtgcagcacaacacttcc
gaagccggcggtgcggcaactccactcgatgaatccgcaggcttgactgtgcctggtacc
caccccgataacccatggggtaaagacattctgattggtcgttatcgtccggtggacgct
ggtgcacgccgttgggatattgaatcggactcgatgagactggttgctggcttgcgtggc
accctgaatgagtgggattgggaagttgctgcacaaaagggacgtcaggaacagactcag
accggtgaccgtagtcaaggttgggttcgtgtggattacttgcagcgtgagattgatgct
ggccgttacaatccatttggagctgccgtcaactcacccgacgttatcgatgctatcacc
accagtctggtgcgtcagggcgtctcccacatgacggcttacaatgccagcattaccggt
caggcgttcaccctggccgaacgtgatgtgatgatggctgcgggcgttgaatatcgtgaa
gaagacgtaagcgacgtgcccgatgagcagttccagcgtgggctgattttcggtaccgag
gctgtttctgcaaacgccgagcgtgaccaatgggctgcctacgtcgagttctctattccg
gttactgataactttgaactgcagctggcaggtcggtacgacaattacagcgattttggc
accaccaccaatccaaaggtggctttccaatggggtatcactgacgaaatcaccgcccgt
ggttcctgggctaccggcttccgcgcaccatccctggcacagattggcctgggcccttca
caggaaagtttgttcctggatgattactacttctgccaggcaaatggtttagatgcatcc
gagtgtgagaatttggaccaaaacttcctgttctcagggaacaaagagctggaggctgaa
gagtctgaaagttggaacgtgggtatgatttacgccccgaatcagtcatttgatctgagc
ttggactggtacaacatcacgcaggacaataagatcgacaagcttgagcctcaagatgtg
tatgacgccaattgcggctctcagaacagtcctatttgtcagcgattggctccggttggc
gctgactcgttgggaacgattgacaagatcttgtccagctttgtgaatatcagctctcag
gaagtgcaaggtatcgacgtgtccagtcactatactttggctaccgatggttatggtgac
gtaaagtttgggctggaatacagctatctgatggactttgagaaaggtgataaagactgg
accggaaagtatcgtttcccagagcaccgttggttaggtactactaattggaccaaagat
gatttgtcagtcaacctcaaccttagctacataggtgaatttgctgactataatgaaacc
cgcaacgtagacgcccagctgttggtggatatgtcagcgtcctatcgcttcagtgaaact
ttgaagtggactattggtatgaataacgtgctggatgaagagcctccatttgccattggt
gatggcgatggcgatctctatggctacgtgatggcgactcataacccaatgggacgttat
gcctacatcaagctgaatatcaacttctga
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