Shewanella amazonensis: Sama_2831
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Entry
Sama_2831 CDS
T00445
Name
(GenBank) Uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
saz
Shewanella amazonensis
Pathway
saz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
saz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Sama_2831
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
saz03400
]
Sama_2831
Enzymes [BR:
saz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Sama_2831
DNA repair and recombination proteins [BR:
saz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Sama_2831
Prokaryotic type
Sama_2831
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ABM01034
UniProt:
A1S9H7
LinkDB
All DBs
Position
complement(3368450..3369115)
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AA seq
221 aa
AA seq
DB search
MAVACWQDFIAAESEKPYFKSLTEFVAAERQSGKTIFPPEAEVFAAFEHTPLDKVRVVLI
GQDPYHGAGQAHGLCFSVKPGIKPPPSLVNMYKELSADIPDFETPSHGYLLPWARQGVLM
LNTVLTVEEGKAHSHAKAGWETFTAAALKLLNERDTPIIFVLWGSHAIKKGKGITAPQHQ
VLSGVHPSPLSAYRGFFGCGHFSKINELLKAHGGEPIDWRL
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atggccgttgcatgttggcaggactttattgccgccgaatccgagaaaccttactttaaa
tctctcactgaatttgttgccgccgaacgccaaagtggcaaaaccatttttcctcctgaa
gcagaagtattcgcggcgtttgagcacacgccattggataaggtgcgggtcgtgctgatt
ggccaggacccataccatggtgccgggcaggcccatggactctgtttctcggttaagcct
ggtattaagccgccgccctcgctggtgaatatgtataaagagctctcagccgatatcccc
gactttgagacaccgtcacacgggtacttactgccctgggccagacagggtgtgttgatg
ctcaacaccgtgctcacggttgaggagggcaaggcacactcccacgccaaggcgggctgg
gaaacctttacagcggccgcgcttaagctgctcaatgagcgtgatacgccgattatcttt
gtgctttggggcagccatgccatcaagaagggcaagggtattactgcgcctcagcatcag
gtgttgtcgggtgtgcacccatcgcccttatccgcctatcgcggcttttttggatgcggc
cacttttcgaaaatcaacgagttattgaaagcacatggcggtgagcccatcgactggcgc
ctgtaa
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