Shewanella amazonensis: Sama_2896
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Entry
Sama_2896 CDS
T00445
Name
(GenBank) putative TonB-dependent outer membrane receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
saz
Shewanella amazonensis
Brite
KEGG Orthology (KO) [BR:
saz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
saz02000
]
Sama_2896
Transporters [BR:
saz02000
]
Other transporters
Pores ion channels [TC:
1
]
Sama_2896
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Big_8
KdgM
Motif
Other DBs
NCBI-ProteinID:
ABM01099
UniProt:
A1S9P2
LinkDB
All DBs
Position
complement(3440784..3443387)
Genome browser
AA seq
867 aa
AA seq
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MVADRSRRDKKHNKQLRAKMMTIQDTKKFGLSSLSLAVSLALTGVMGASAAWAEEAQEEA
QASDNIEKIAVVGSRAAPRSVGESPVPVDIIGNEEFTKNGTTDMNDLLGKVVPSYNVNAQ
PISDAATLVRPANMRGLAPDHTLILLNGKRRHRAAVISFLGGGVSNGAQGPDISVIPAVA
LKQVEVLRDGAAAQYGSDAIAGVINFQLKDNAEGGTIEARYGEFYEGDGSSPMIAANVGM
PLTDNGFFNVSAEYKTADATSRSVQRDDAADLIAAGNTAVANPAQIWGAPETKEDFKFFF
NAGLDLNANQTAYMFGNWARRDVEGGFYFRNPNNRGGVYSGDDGETLLVGDLTGDMSGNC
PVITITNNVPDPVALAQVKNDPDCFVFNEMFPGGFTPRFGGVIEDTSLSAGVKGTTASNL
NYDFGVSYGKSDADFYIKNTVNASLGPDSPTDFNPGRYVQMERGASLDFSYFEVDEWSFA
AGLEFRRETFEIYNGDPASFELGPLYTQGFGIGSNGFPGFKPQDSGSWSRNNYAAYFDAE
HDLTDSWLVTGALRYEYYDDFGSTTNWKLSSIYNVTDDFSLRAAASTGFRAPTVGQSNVR
NVTTAFSGGQLEDQATLPPTNPISIQKGATPLEPETSVNLSFGAVLTVGEFFLTADYFHI
TLEDRITQSSNQELTQADKDALIAQGVLDANSYSSVLYFTNDFDTTTQGVDLVASYAPDW
LDGANFALAYNWTETTVDRFNPDNISEARVKVLEEALPHHKGTLTWTQELGANLRSMVRM
NYYGEFYEDHLDSEGDLPIYNGSTVTFDAEVGYDFNDNWSLAVGAQNLFDTYPDDNPWAG
IAGAAYPVTSPYGFNGGYYYARLNYNF
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atggttgccgacaggtcccgaagagataaaaaacataataaacaattgagagcaaagatg
atgaccatacaagacactaaaaagtttggcttgagctcattgagcttggcagtctcgctg
gctttgacaggggttatgggggcaagtgcagcctgggccgaagaggcgcaggaagaagca
caggcgagcgataatatcgagaagattgccgtcgtgggttctcgtgctgcacctcgctca
gtgggtgaatccccagtgccggtagacatcataggaaatgaagagttcaccaagaatggt
accaccgacatgaacgacctgcttggcaaggtagttccttcttataacgttaatgcccaa
cccatttcagatgccgcaactctggtgcgccccgctaacatgcgcggtctggcgcctgac
catacattgattttgttaaacggtaagcgtcgtcatcgtgctgccgttatttctttcctg
ggcggtggtgtgtcaaacggtgcccagggcccagacatttcggtgatccccgctgttgca
ctcaagcaggttgaagtactgcgtgatggcgctgcggcccagtacggctctgatgctatt
gccggcgtgattaacttccagctcaaagacaatgccgaaggtggcaccatcgaagcccgt
tacggtgagttttacgaaggggatggttccagccccatgatcgcggccaacgtgggtatg
ccactgactgataacggtttctttaacgtcagcgccgaatataaaaccgctgatgccacc
agtcgcagcgtgcagcgtgatgatgctgccgacttgatcgccgccggtaacactgccgtg
gcgaaccccgctcagatttggggtgcccctgaaaccaaagaagactttaagtttttcttt
aacgccggtctggatctcaatgccaatcaaactgcttacatgtttggtaactgggcccgc
cgtgacgtagaaggtggcttttacttccgtaaccccaataaccgcggtggcgtatacagc
ggtgatgatggtgagacgctgctggtgggtgatctgaccggtgatatgtccggtaactgc
cccgttatcaccatcaccaacaacgtgcctgatccagtggcactggcacaggtgaagaac
gatccagattgctttgtgttcaatgaaatgttccccggtggctttacgccacgttttggt
ggtgtcattgaagacacctccctgagcgccggtgtgaaaggcaccacagcaagtaacctg
aactacgattttggtgtcagctacggtaagagtgacgccgatttctacatcaagaacaca
gtcaacgcctctctgggcccagattcgcctaccgacttcaatcccggtcgttatgtgcag
atggagcgcggtgcgtctctggatttcagctactttgaagtggatgagtggagcttcgcc
gccggtttggaattccgccgtgagacctttgaaatctacaatggcgacccagcctccttt
gagcttggcccactgtacacccagggttttggtatcggttccaacggtttccccggcttt
aaaccccaggactctggttcatggagccgcaataactacgccgcttacttcgatgccgag
cacgatctgaccgatagctggttggtaaccggtgccctgcgttacgagtactatgatgat
ttcggttcaaccaccaactggaaactgagctccatctataatgtgaccgacgacttctcg
ctgcgtgccgcggccagcaccggcttccgtgctcctacagtgggccagagcaacgtgcgt
aacgtaacaacggcgttctccggtggtcagttggaagatcaggcaaccctgcctcctacc
aaccctatctccatccagaaaggggcgacaccgctggagccggaaacttcggttaacctg
tcatttggtgccgtgttgactgtgggtgagttcttcctgacggcggattacttccacatt
accctggaagaccgtatcacccagagttccaaccaggagctgacccaggcggataaggat
gcgctgattgctcagggtgtgctggatgccaacagctacagttcagtgctctacttcaca
aatgacttcgataccacgactcagggtgtcgatttggttgccagttacgcacctgattgg
ctggatggcgccaactttgcgctggcctataactggactgaaaccaccgttgacagattc
aatccggacaacatcagcgaagcccgcgtgaaggtgcttgaagaagcgctcccacaccac
aagggtaccctgacctggacccaggagctgggtgccaacctgcgctctatggttcgcatg
aactactacggtgagttctatgaagaccacctggattcagaaggtgatttgccaatctac
aatggctctactgtgacctttgacgctgaagtaggttatgacttcaacgacaactggagc
ctggcagtgggtgcacaaaacctgtttgatacctacccagatgacaacccatgggccggt
attgcgggtgcggcttaccctgtgacttcaccctatggattcaacggcggttactactac
gcacgtctgaattacaacttctga
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