Shewanella amazonensis: Sama_3036
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Entry
Sama_3036 CDS
T00445
Name
(GenBank) transporter, putative
KO
K22051
miniconductance mechanosensitive channel
Organism
saz
Shewanella amazonensis
Brite
KEGG Orthology (KO) [BR:
saz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
saz02000
]
Sama_3036
Transporters [BR:
saz02000
]
Other transporters
Pores ion channels [TC:
1
]
Sama_3036
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MscS_TM
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
MscS_porin
Motif
Other DBs
NCBI-ProteinID:
ABM01239
UniProt:
A1SA32
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All DBs
Position
3611651..3614893
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AA seq
1080 aa
AA seq
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MAELISLQPKFGAMLRFLLIAFFFFPLFSLANPSLQLEKRLGFSQGTNTPQPSVSQQTLE
LTETAELLAQQAAEYQQQLLGFVDEKARLQKALAATQKDLPLARRQDLNQQASAAYLQLS
TLKEEETQLIQQHSTLLQRHNQLPTAVANARQALIQHQKAPQAPLDSPNGALQLAQRRYY
EQNLATLEAEQASSQKRIELAQFKLQLVRAQLRQQELFIEKLNRAISSQRQAVTDATLAN
NVSTDTEPQDALSQQLQTNNALLGQKLQTLTLQIDNVVDMQEVAEKRYQEQSLQVSSVQE
QISWVKTNSAFGERFLQMLQSLPKPPNPEHLQNQIADARLARYQMEQELARNQEQLDQKS
LYSEAQYSLLQAEQKLLKQMLQGFDLLLSELAKLKVSHTELNAQYVTLKNTLSEHLFWVP
NAAPIGKLWLTDLHRSLIWLVQQAPWQQLSMALDEQSDYWSWWLILLVLCWVIQDVIRPR
FDKAMNHFLQPVGNVTQDDFKYTFETLLLTLGYALLRPAPIVLAGGFFMLSQYNLVQAVG
AGILVSGCVYLVYRFMFLLSIEKGLLIGHFRRPREVIEHGKQRLKAAMLLALPLVAVVSF
TEILDVSLVRNSLGRGAFILLCLQLLWFYRDILKYAKGYRQSHEPQGKNRRLLQRFLWLM
LLLTPAICTLLALRGFYFTSFQLMLQLQISLLLALGFLLLYQLIKRWMLIERRRIAFDRA
KAKRAEKLAQRERGETVSADSQDVYEEPKVDLETISSQSLGLVRSLLILAFLASLIGLWT
QTHSALFSFLDGINLWTSTAIIDGGEQLVPITLKSVLFGVLIMVFSLMIATNLPGLLELV
ILQRLDLTPGTGFAITTVSRYLVVMVGTLVGFSTLGMEWSKLQWLIAALSVGLGFGLQEI
FANFISGLIILFEKPVRIGDTVTIRDLTGTVSKIQIRATTIIDWDRKEIIVPNKAFITEQ
LINWSLSDPITRVIIKVGVARDSDPAKVEASLYQAIKECQHALHTPEPEVWFAGFGQHTQ
DYEVRAYAKDMGSRWPLRHDLHKRISTKLKENNLELAYPQMEITINQGGVPSRDAQIQLR
NT seq
3243 nt
NT seq
+upstream
nt +downstream
nt
atggctgagttgatttcacttcagcccaagtttggtgccatgttacgttttttgctgatt
gcgttcttttttttcccacttttctccctcgccaacccctctttgcagttggaaaaacgg
ctgggcttctcccagggaaccaacacacctcagccgagtgtttctcagcaaacactggag
ctgacagaaaccgccgaactccttgcccaacaggccgctgaatatcaacagcagctgctg
ggctttgtcgatgaaaaagcccgtttgcaaaaggcgctggcggcgacacaaaaagacttg
ccattggccagacggcaggatttgaatcagcaggcatcggcagcctatttacagctgtcg
accttaaaggaagaagaaacccaactcatacagcagcacagtacgctgctgcaacgtcat
aatcagttgcccaccgcggtggcaaatgccagacaagcccttatccagcatcaaaaggct
ccccaagccccattggacagccccaacggggctttgcaattggcccagcgacgctattac
gagcagaacctggccacactcgaggctgaacaggcatccagccagaaacgtatagaactg
gcgcaattcaaattgcagttggtacgggcacagttgcggcaacaggaactcttcatcgaa
aagctgaaccgcgccattagcagccagcgtcaggccgttacagacgcgacgctggccaac
aacgtctccacagacacagagccccaggatgccctctcccagcagctgcaaaccaacaat
gccctgcttgggcaaaaactgcagaccctgaccctgcagatagacaacgtggtcgacatg
caggaagtggccgaaaagcgctatcaggaacagtcactgcaagtctccagcgttcaggaa
caaatctcctgggtgaaaaccaattccgcctttggcgaacgctttttacagatgttgcaa
agcctgccaaagccccccaatccagaacatttacaaaatcaaatcgccgatgcacgtctg
gcccgttaccagatggagcaggagctggcgcgtaatcaggaacaactggatcaaaaatcc
ctctacagcgaagcacagtacagcctgctccaggccgagcaaaaactactgaagcagatg
ctgcagggttttgacttgctgctgagcgagttggcaaaactcaaggtgagccacactgag
ctcaatgcccaatatgtcaccttgaaaaataccctcagtgagcacctgttttgggtaccc
aacgccgctcccatcggcaagctctggctgacagatttgcatcgcagcctgatctggctt
gttcaacaggcaccatggcagcaattgtcgatggcactggatgaacagagtgattactgg
tcgtggtggctgattttactggtgctctgctgggtgattcaggatgtgatacgccctcga
tttgataaggccatgaatcactttttacagcccgtcggcaacgtgacccaggatgatttc
aagtacaccttcgaaaccctgctgctgaccctgggttacgccttgcttcgccctgccccc
attgttctggccggcggctttttcatgcttagtcagtacaatctggtgcaggccgtgggt
gccggtatcctggtgtccggttgtgtctatctggtttaccgctttatgtttctgctgtct
attgagaaaggcctgctgataggccatttccgtaggcccagggaggtaatcgagcatggt
aagcagcgccttaaggcggcgatgctactggctctgcccctggtggccgtagtcagtttc
accgaaattctggatgtctctctggtcagaaacagtctcggccggggcgcctttattttg
ctgtgcctgcaactgctgtggttctatcgcgatatcctcaaatacgccaaaggctaccgt
caaagccacgagccccagggaaagaaccgccgtctgctgcagcgctttttatggttgatg
ttgctgctgactcccgctatttgtaccttgctggcgctgcgcggtttttacttcacttcg
ttccagcttatgttgcagctgcagatatccctgttgctggcactgggctttttgctgctg
tatcaacttatcaagcgttggatgctgattgagaggcgccgaatcgcttttgaccgcgcc
aaggcaaaacgggctgaaaagctggcacagcgggagcggggtgaaactgtatccgcagac
agccaggatgtgtatgaagagccaaaagtagatctcgaaaccatttccagtcagtcactt
ggactggttcgttccttgttgattctagcgtttctggccagcttgattggcctgtggacg
caaacccactcggcgctgttttccttcctcgacggcatcaacctctggaccagtaccgcc
attattgacggtggcgaacagctggtgcccattaccctgaagtcggtgctgtttggggtg
cttatcatggtgttctcgctgatgatagccaccaatttgcccggcctgctggagctggtt
attctgcagcgactggacttaaccccgggcacaggttttgccattaccacggtcagccgc
tacctggtggtgatggtgggcaccctcgtgggcttctccacgctggggatggagtggtcc
aagttacagtggctgattgccgctctgtcggtgggcttgggttttggtttgcaggagatt
tttgccaactttatttcgggtcttatcatactgtttgaaaaaccagtgcgtatcggcgat
acggtgaccattcgcgatctcaccggcaccgtcagtaaaattcagattcgagccaccacc
atcatagattgggacagaaaagaaattatcgtccccaataaggcctttatcaccgagcag
ctgatcaactggtcgctgtccgacccgataacccgggtgatcatcaaggtgggcgtggcc
agagattccgatcccgccaaggtcgaagccagcctttatcaggccatcaaagaatgccag
catgcactgcacactcctgagcccgaagtctggttcgctggctttggtcagcacacccag
gattatgaagtaagagcttatgccaaggatatgggcagccgctggccgctgcgacacgat
ctgcacaaacgtatcagtaccaagctgaaagaaaacaatctggagctggcctatccccag
atggaaatcaccatcaatcaagggggtgtgccgagccgtgacgcccaaatccaactgcgc
tga
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