Shewanella amazonensis: Sama_3058
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Entry
Sama_3058 CDS
T00445
Name
(GenBank) primary replicative DNA helicase
KO
K02314
replicative DNA helicase [EC:
5.6.2.3
]
Organism
saz
Shewanella amazonensis
Pathway
saz03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
saz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Sama_3058
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
saz03032
]
Sama_3058
Enzymes [BR:
saz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
Sama_3058
DNA replication proteins [BR:
saz03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Sama_3058
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DnaB_C
DnaB
AAA_25
ATPase
AAA_33
divDNAB
DUF5410
nSTAND3
GvpD_P-loop
PAXNEB
CbiA
Motif
Other DBs
NCBI-ProteinID:
ABM01261
UniProt:
A1SA54
LinkDB
All DBs
Position
complement(3633749..3635155)
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AA seq
468 aa
AA seq
DB search
MSQEAAFKPKGKLKDAQVEAIKMPPHSIEAEQSVLGGLMLDAEAWDKVAEAVVREDFYSR
SHRLIFSAMQKLVEQGQPLDLITVSEQLELNNELDDAGGFAYLGEIAKNTPSAGNILSYA
EIVRERAVVREMIRVAHEIADAGYNPEGRDSSALLDLAETKVFKIAEQRANANEGPEDIK
AILEKTVDKIEQLYNNPHNGVTGVSSGFSDLDRMTAGFQSGDLVIVAARPSMGKTTFAMN
LCEYAAMNEDKPVLIFSLEMPSEQIMMRMLASLGRVDQTKVRTGQLDDEDWARVSSTMGL
MLEQGKMYIDDSSGLTPTEVRSRARRVAREWGGLSMIMVDYLQLMQVPALADNRTLEIAE
ISRSLKALAKELEIPVIALSQLNRSLEQRADKRPVNSDLRESGSIEQDADLIMFIYRDEV
YNNDSQDKGTAEIIIGKQRNGPIGRVRLTFQGQFSRFDNYAGPQFEED
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaggaagccgcctttaaaccaaagggcaagttaaaagatgcccaggttgaagcc
atcaaaatgccgccgcattcgatagaggccgagcaatcggtgcttggcggcctgatgttg
gatgctgaggcttgggacaaagtggccgaagccgtggttcgtgaagacttttattcccgc
tctcaccgattgattttctctgccatgcaaaagctggtggagcagggccagcccctggat
ttgattactgtgtcggaacagctcgaactgaataacgagctggacgatgccggcggtttt
gcctatttaggtgagattgccaaaaacactcccagcgccggtaacatattgtcttacgcc
gaaattgtacgtgagcgcgccgtggtgcgggaaatgattcgggttgcccatgagattgcc
gacgcgggttacaaccccgaaggtcgtgactccagtgccttgttggatctggcggaaacc
aaggtgttcaagattgccgagcagcgggccaatgccaacgaagggcccgaagatatcaag
gcaatcctcgaaaaaaccgtcgataaaatcgagcagctttataacaacccccacaatggc
gtgaccggggtatccagcggcttttcggatctcgaccgtatgaccgcaggttttcaaagc
ggtgaccttgtgattgtggcggcacgtccgtccatggggaaaaccaccttcgccatgaat
ctctgcgaatacgccgccatgaacgaagacaaaccggtactgattttcagtctcgagatg
ccctcagaacagatcatgatgcgtatgctggcgtcccttggccgcgttgatcaaaccaag
gtacgtaccggtcagctggatgatgaggattgggcgcgggtgtcttccaccatggggttg
atgctcgagcagggcaagatgtacatcgatgacagttctggcctgaccccaaccgaggta
cgcagccgcgcccgcagggtggcccgtgaatggggtggtctgtcgatgatcatggtggac
tacctgcagctgatgcaggtaccggcgctggccgataaccgtaccctggaaattgccgaa
atttcccgctcgctcaaggcacttgccaaagaactggaaatccctgtgattgccctgtca
cagcttaaccgctcgctggaacaaagggccgacaaacgccctgtgaactcggatctgcgt
gaatccggctctatcgagcaggatgcggaccttatcatgtttatctaccgggacgaggta
tacaataacgattcccaggataaaggcacggccgaaatcattatcggtaagcagcgtaac
ggccccattggccgggtgcgtctgacctttcaggggcaattctcccgctttgacaattat
gccggccctcagtttgaagaagactga
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