Shewanella amazonensis: Sama_3220
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Entry
Sama_3220 CDS
T00445
Name
(GenBank) succinate dehydrogenase subunit A
KO
K00233
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
7.1.1.12
]
Organism
saz
Shewanella amazonensis
Pathway
saz00020
Citrate cycle (TCA cycle)
saz00190
Oxidative phosphorylation
saz00620
Pyruvate metabolism
saz00650
Butanoate metabolism
saz00720
Other carbon fixation pathways
saz01100
Metabolic pathways
saz01110
Biosynthesis of secondary metabolites
saz01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
saz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Sama_3220
00620 Pyruvate metabolism
Sama_3220
00650 Butanoate metabolism
Sama_3220
09102 Energy metabolism
00190 Oxidative phosphorylation
Sama_3220
00720 Other carbon fixation pathways
Sama_3220
Enzymes [BR:
saz01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
Sama_3220
7. Translocases
7.1 Catalysing the translocation of protons
7.1.1 Linked to oxidoreductase reactions
7.1.1.12 succinate dehydrogenase (electrogenic, proton-motive force generating)
Sama_3220
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
HI0933_like
GIDA
Pyr_redox_2
NAD_binding_8
FAD_oxidored
Pyr_redox_3
Motif
Other DBs
NCBI-ProteinID:
ABM01423
UniProt:
A1SAL6
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Position
complement(3812088..3814127)
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AA seq
679 aa
AA seq
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MKLIYTDCLVVGAGLAGLRVAIAAKERGHDTLVLSLIPAKRSHSAAAQGGMQASLGNTVK
GLGDNEDVHFQDTVKGSDWGCDQTVARMFAHCAPKAVRELANWGVPWTRVTKGPREVVVN
AERITIEEAEAAHGLINARDFGGTKKWRTCYTADGTGHSLLYAVDNKAISLGIPVHERVE
ALSIIHDGERCHGVVARCLITGELRAYIGKSTTIATGGYGRIYEVSTNAIICEGVGQALA
LETGVATLGNMEAVQFHPTAIVPVGILTTEGCRGDGGLLRDKDGYRFMPDYEPEKKELAS
RDVVSRRMTEHMRKGKGVDSPYGPHLWLDITLLGRKHIETNLREVKEICENFLGIDPAKD
WIPVRPTQHYSMGGIRTTPTGESPQLKGLFAVGEAACWDMHGFNRLGGNSLAETVVGGMI
IGKYVADFCDDNDLVLDTGLAKRYVDKVRTEIDELIEGKGTENPWELKSAMQRVMMDYVG
IFRNGPELNEAVKQLKALLARSVNLGVSCKKRHANPELVEALRVRRMLKVALTVACGAAA
RTESRGAHAREDFPQRNDKDWLCRTLASWPDANALEPTLSYEPLDVMKMELPPGYRGYGA
DNAIAHPDTAKREAEIAELLAALGPNASREAIQQALMPFELPESLTPANERLADRLNGLV
NIDTAASPTTPNIAGDDNS
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
gtgaaactcatttatacagactgtcttgtggtgggcgcgggccttgcgggtctcagggtt
gccattgccgccaaagaaaggggccacgataccttggtgttatccctcattccggccaaa
cgcagccattcggcggcggcacagggcggtatgcaggcgagcctggggaatacggtcaag
ggccttggcgataatgaagatgtgcactttcaggacacggtaaagggctcagactggggc
tgcgaccaaaccgtggcgcgcatgtttgcccactgtgcccccaaggcggtgcgggagctg
gccaactggggcgtgccctggacccgggtgaccaagggcccccgtgaagtggtggtaaat
gccgagcgcatcaccatcgaagaagccgaagccgcccatggactgattaacgcccgcgat
tttggtggcaccaaaaaatggcgcacctgctacacagccgacggcaccggccactcgctc
ttgtatgcggtggataacaaggccatttcccttggcattccagtccatgagcgggtagaa
gccctgtcgattattcacgatggcgagcgctgccacggtgtagtggctcgctgccttatc
acaggtgaactgcgcgcctatatcggcaagtccactaccatagccaccggtggctatggc
cgtatttatgaggtgtccaccaacgccatcatctgtgagggtgtaggtcaggcactggcg
ctggagaccggcgtcgccacccttggcaacatggaagcggtgcagtttcaccccaccgcc
attgtgcccgtggggatcctcactaccgaaggttgccgcggtgacggtggtttgctgcgt
gacaaagacggctaccgctttatgccggactatgagccggagaaaaaagagctcgcctcc
cgcgacgtggtgtcgcgccgcatgacagagcatatgcgcaagggcaagggcgtcgacagc
ccatacggcccgcacctgtggctggatatcaccctgctgggtcgcaaacacatagaaacc
aacctgcgggaagtgaaagaaatctgcgaaaacttcctcggcattgaccccgccaaggat
tggatcccggtgcgtccgacccagcactactccatgggcggtatccgcaccacgccaacc
ggtgagagcccgcagctcaagggcctgtttgccgtgggagaggccgcctgctgggatatg
cacggttttaaccgcctcgggggtaactcgctcgctgaaaccgtggtgggcggcatgatc
atcggcaaatacgtagcggacttttgtgacgataacgatttggtgctggataccggcctg
gccaaacgttatgtggacaaggtgcgcaccgaaatcgatgagttgattgaaggcaagggt
actgagaacccctgggagctcaagtctgcgatgcagcgggtgatgatggactatgtgggc
attttccgtaatggccccgaactcaatgaagcagtaaaacagcttaaggcgttgctggca
cgctcagttaatctgggtgtgagctgtaaaaaacgccatgccaaccccgaactggtagaa
gcgctgcgggtacgccgcatgctgaaagtagcgctcaccgtggcctgcggcgccgcggcc
cgcaccgagagccgtggtgcccacgcccgggaagacttcccacagcgcaacgacaaagac
tggctgtgccgcaccctggcaagctggcccgacgccaatgccctggaacccacactcagc
tacgagccattggatgtaatgaagatggagctaccgccgggctatcgaggttatggtgca
gacaatgccattgctcacccggacaccgccaaacgcgaggccgaaattgctgaactgctt
gctgcccttggccccaatgccagccgagaggcaatccagcaggctctgatgccctttgag
ttacccgaatcactgacaccggccaacgaacgcttggccgaccgcctcaatgggctggtg
aacattgacaccgcagcgagcccaactacgcccaacattgccggagacgataattcatga
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