Shewanella amazonensis: Sama_3259
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Entry
Sama_3259 CDS
T00445
Name
(GenBank) toxin secretion ATP-binding protein
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
saz
Shewanella amazonensis
Pathway
saz02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
saz00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Sama_3259
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
saz02000
]
Sama_3259
02044 Secretion system [BR:
saz02044
]
Sama_3259
Transporters [BR:
saz02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
Sama_3259
Secretion system [BR:
saz02044
]
Type I secretion system
Adhesin protein transporter
Sama_3259
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_21
SMC_N
Peptidase_C39
AAA_15
AAA_13
AAA_29
AAA
SLATT_1
AAA_23
MMR_HSR1
nSTAND3
DUF87
Motif
Other DBs
NCBI-ProteinID:
ABM01462
UniProt:
A1SAQ5
LinkDB
All DBs
Position
3865958..3868129
Genome browser
AA seq
723 aa
AA seq
DB search
MSLSASGSDEQWTIAASTRVTVDPLLDSLVLLTEYFGSPCSSESLAAGLPLSGAILTPDL
VPQAAARAGLNARLTRKGLDQISPIMMPCILLLKDKKACLLRELTSEKAVIQLPETGGEE
TLPVEQLETLYVGYLFLVKQQYRGDMRFDVHHHDNKSHWLLKTLKDAAPIYRDALIASVL
VNLFALVSPLFIMNVYDKVVPNLAFESLWVLAIGAGIAYIFDLVMRQLRSYLIDVAGKKV
DIIVSSQLFAKAVGIPLSKRSPSVGGMAKQLGEFDSIRDILTSATITTLVDLPFAVFFLI
IIFIVAGDLAVLPLLGGAIIIGYTLYIQPKLKAAIDESNKFASLKHGHLIESLAALESIK
AYGAEGLVQKSWQQMIGHTANWQLKAKKLSNSVSNVASFMVQLTVVGVVILGVYRVADNA
ISMGGIIAAVMLSSRAMSPMAQLASLLTRANHTASALRQLDQIMTQEDEFENKGHLVSKT
RLMGKIEADHVSFCYPGSEKPVLHPTSLSIQPGEKVAIIGRNGSGKSTLAKLLCGLYKPT
KGSLRYDGIDSAQIHPSDLRRNFGYLPQDVVLFHGSIRDNILFGTRQVSEHQLIRAVQIS
GVSLFTNLESEGLDQQVGEGGQALSRGQRQTVALARATLNDPPILLMDEPTASLDARAEK
QFIRAMEHVSKDRTLVIITHKMHLLKLVDRVIVLDRGHVLADGPKNDVLEKLSLGLLAGG
AKG
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
gtgtctttatctgcttccggaagcgatgagcaatggactatcgcagcttccacgcgggtc
actgtcgatcccctgttggatagcctggtgctcctcactgaatattttggctccccctgc
tccagtgaatcattggcggcgggacttcccttatctggagccatactgacgcctgatttg
gtccctcaggctgcggccagagccggtcttaacgcccgcttgacccgtaaaggtctggac
cagatttccccaataatgatgccctgcatcctgttgttaaaagataagaaagcttgtctt
ctcagagaattgacctctgaaaaagctgtcattcagttgcctgaaaccggcggagaggag
accctccccgttgagcagctcgaaactctctatgttggttatctgtttctggtaaaacag
caatatcggggtgatatgcgctttgacgtgcatcatcacgataataaaagccactggtta
ctgaaaaccttaaaagatgcggcgccaatataccgggatgcgcttatcgcctccgtgttg
gtgaacctctttgccttggtttctcctctctttatcatgaatgtgtacgataaagtggtg
cccaacctggcattcgagtctctgtgggtactggccatcggtgcaggcatcgcttacatc
tttgacttggtgatgcgccagcttagaagctacttgattgatgtagcaggtaaaaaagtc
gacatcatagtgtcatcacaactgtttgccaaagctgttggtattccactgtcaaaacgc
tcccccagcgttggcggaatggccaaacagctcggcgaatttgacagcattagggacatt
ctgacatccgctaccattaccaccctggtggatttgccctttgccgtctttttcctgatc
atcatatttattgtggctggcgatctggctgtgctgccattgctcggcggcgccatcatt
attggctacaccttgtatattcaaccaaagcttaaagctgccattgatgagagtaataaa
tttgccagcctgaagcatggccacctgattgaaagtctggcagcactggagtccatcaaa
gcctatggcgccgaggggctggtgcaaaaaagctggcaacagatgattggtcatacggcc
aattggcagctcaaagccaagaagctgtccaactcggtatcaaacgtcgccagctttatg
gtgcagctaaccgtggtgggcgtggtcatcctgggggtatatagggtcgccgacaatgcc
atttccatgggtggcattatcgctgccgtgatgctttccagccgcgccatgtccccgatg
gcgcagttggcgagtttgttaacccgggccaaccacactgccagcgccttaagacagctt
gaccagatcatgacgcaggaagatgagtttgagaataaagggcatttggtcagtaaaacc
cgtctaatgggtaaaatcgaagccgaccatgtgagcttttgctatccgggttccgaaaaa
cccgtcttacatccaacgtctttgtctattcagccgggcgaaaaggtggccatcattggc
cgaaatggctcagggaaaagtacgttggccaaactcctgtgtggcctgtataaacccacc
aaaggtagcctcagatacgatggcattgacagcgcccagatccatcccagcgacctgcgc
agaaacttcggttacctgcctcaggatgtggtgttgttccatggttctatcagagacaac
atactcttcggtacccgccaggtatctgaacatcagctgatccgcgcagtgcaaatctct
ggcgtcagcctctttaccaatctcgaatccgaaggtctggatcaacaggtcggcgaaggc
ggacaagccttgtctcgggggcaacgccaaactgtcgccctggccagggccaccctgaat
gacccaccaattttgctgatggacgaacccactgccagcctggatgccagagcggaaaaa
caatttatcagagctatggagcatgtcagtaaagacaggactctcgttatcatcacccac
aagatgcacctgctgaaattggtcgaccgggtgatcgtattagacagaggtcatgtactg
gccgatggacccaaaaacgacgttcttgaaaaactgagtctggggctgcttgctggaggt
gcaaagggatga
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