KEGG   Shewanella amazonensis: Sama_3334
Entry
Sama_3334         CDS       T00445                                 
Name
(GenBank) ornithine decarboxylase
  KO
K01581  ornithine decarboxylase [EC:4.1.1.17]
Organism
saz  Shewanella amazonensis
Pathway
saz00330  Arginine and proline metabolism
saz00480  Glutathione metabolism
saz01100  Metabolic pathways
saz01110  Biosynthesis of secondary metabolites
saz04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:saz00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00330 Arginine and proline metabolism
    Sama_3334
  09106 Metabolism of other amino acids
   00480 Glutathione metabolism
    Sama_3334
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    Sama_3334
Enzymes [BR:saz01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.17  ornithine decarboxylase
     Sama_3334
SSDB
Motif
Pfam: OKR_DC_1 OKR_DC_1_C OKR_DC_1_N Beta_elim_lyase GKRP_SIS_2
Other DBs
NCBI-ProteinID: ABM01537
UniProt: A1SAY0
LinkDB
Position
3960625..3962787
AA seq 720 aa
MNSLKIAASLSVRACFDTKREVVNVLTTDFCDVGAAVVSVTDVNNGIVDKIKNTGLNLPI
FVSVCCEEAFPDDFCDTITGVFELCNAKTDFYGKQVETAVRRYQESLLPPFFGTLKKYVE
MGNSTFACPGHQGGQFFRKHPVGRQFFDFFGETVFRSDMCNADVKLGDLLIHEGAPHDAQ
AYAAKVYNADKTYFVLNGTSASNKVVCNALLAPGDLVLFDRNNHKSNHHGALIQAGATPV
YLETARNPFGFIGGIDSHCFDEAYLRDEIGKVAPERVQAARPFRLAIIQLGTYDGTIYNA
RQVVDRIGHLCDYILFDSAWVGYEQFIPMMKDCSPLLLELGAEDPGIIVTQSVHKQQAGF
SQTSQIHKKDSHIKGQERYCNHKRFNNAFMMHASTSPFYPLFAALDVNAKMHEGASGRYL
WREAVKAGIEARKLLLKKCKYIKPFIPTTVEGEPWQSFDTERMADDLRFFEFEPGLKWHA
FDGYEKGQYFVDPCKFLLTTPGINAETGEYEDFGIPATILANFLRENNIIPEKCDLNSIL
FLMTPAEDMAKMQHLVTQIARFEKLIDEDAPLSEVLPNVYRTNRERYEGYSIRRLCQEMH
DLYVSRNVKQLQKEMFRAAHFPKAVMNPQDANIAFVRGKAELVPLSEIEGQIAAEGALPY
PPGVLCMVPGEVWGGAVQRYFLALEEGINLLPGFAPELQGVYLERADNGRVQAMGYVLKR
NT seq 2163 nt   +upstreamnt  +downstreamnt
atgaattcgttaaaaattgccgccagtttatctgttcgcgcctgttttgataccaaacgg
gaagtcgtcaacgtattaaccactgacttttgcgatgtgggtgccgccgttgtttctgtt
actgatgtaaataacggcattgtcgacaaaattaaaaataccggtttgaatttaccgata
tttgtttctgtatgctgtgaagaagctttccccgatgatttttgcgataccatcaccggg
gtattcgaactctgtaatgccaaaactgacttttatggcaaacaggtcgaaaccgcggtg
cgtcgctatcaggaatccctgctgccccccttcttcggtaccctgaaaaagtacgttgaa
atgggtaactccacctttgcctgtccggggcaccagggtggtcagttcttccgtaaacac
cccgttggccgtcagttctttgatttcttcggcgaaactgtgttccgctcggacatgtgc
aatgccgacgtgaagctgggtgacctgctcatacacgaaggcgcaccccacgatgcccaa
gcctatgcggccaaggtgtataacgccgacaaaacctactttgtactgaacggcacttcc
gcctccaacaaggtggtgtgtaacgccctgctcgcccccggcgatctggtactgtttgac
cgcaacaaccacaaatccaaccaccacggcgccctcattcaggccggtgccactcccgtg
tatctggaaacggcccgcaaccccttcggttttatcggtggtatagactcccactgcttt
gatgaagcttacctgcgggacgaaatcggtaaggttgcccctgagcgggtacaggcagcg
cgcccattccgccttgccatcatccagcttggcacctatgacggcaccatatacaacgcc
cgtcaggtggtggaccgcattggccacctgtgtgactacatcctgtttgactctgcctgg
gtaggctacgagcaattcatccccatgatgaaagactgctcgccgctgctgctggaactc
ggcgccgaagacccgggtattatcgtcacccagtcggtgcacaaacagcaggccgggttt
tcgcaaacctcacaaatccacaaaaaagacagccatatcaagggacaggaacgctactgc
aaccataaacgctttaacaacgcctttatgatgcacgcctccaccagccccttctatccg
ctgtttgcagcactggatgtgaacgccaagatgcacgaaggcgccagcggccgttacctg
tggcgcgaggcagtgaaggccggtatcgaagcccgcaagttgctgcttaaaaagtgcaag
tacatcaagccctttatccccaccacagtggaaggcgagccctggcagagctttgatacc
gagcgaatggccgacgatctgcgcttcttcgagttcgaaccgggccttaaatggcacgcg
ttcgatggctacgagaagggccagtattttgtcgacccctgtaagttcctgctcaccacc
cccggcatcaacgccgaaaccggcgagtacgaagacttcggtatcccggccaccatcctt
gcaaacttccttcgtgaaaacaacatcataccggagaagtgcgaccttaactccatcctg
ttcctcatgacccccgccgaggacatggccaagatgcagcatctggtgacccagattgcc
cgcttcgagaagctgattgacgaagatgcacctttaagtgaagtgctgcccaacgtctat
cgcaccaatcgcgagcgttatgaaggctacagcatccgtcgcctgtgtcaggaaatgcac
gacctctatgtcagccgtaacgtgaaacagctgcaaaaagagatgttccgtgctgcccat
tttcccaaggcggtgatgaatccacaggacgccaatatcgcctttgtgcgcggcaaggcc
gagctggtgcccctcagtgaaatcgaaggccagatcgcggccgaaggcgccctgccttat
ccacccggcgtgctctgtatggtgccgggggaagtctggggcggcgcggtgcagcgctat
ttcctggccctcgaagaaggcatcaacctgctgccgggcttcgcccccgaactgcagggt
gtgtacctggagcgcgccgataatggccgggttcaggctatgggttacgtcctcaaacgc
tga

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