Shewanella amazonensis: Sama_3353
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Entry
Sama_3353 CDS
T00445
Name
(GenBank) protein of unknown function UPF0011
KO
K07056
16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:
2.1.1.198
]
Organism
saz
Shewanella amazonensis
Brite
KEGG Orthology (KO) [BR:
saz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
saz03009
]
Sama_3353
Enzymes [BR:
saz01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.198 16S rRNA (cytidine1402-2'-O)-methyltransferase
Sama_3353
Ribosome biogenesis [BR:
saz03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
Sama_3353
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TP_methylase
RsmI_C
Motif
Other DBs
NCBI-ProteinID:
ABM01556
UniProt:
A1SAZ9
LinkDB
All DBs
Position
complement(3981266..3982111)
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AA seq
281 aa
AA seq
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MSLPPALYIVPTPIGNLGDMSPRAVEILQSVSLIACEDTRHSGRLFSHFGISTRTTSVHD
HNERARAQWIIEKLSQGDAVALVSDAGTPLISDPGYHLVSQVREAGFAVIPLPGPCAAIT
ALSASGLPSDRFSFEGFLPAKDKGRNDKLTALREDPRTLIFYESPHRILQTLEAIVAVLG
GERPMVMARELTKTFETFLSGTAAEVLEKVKSDDNQQKGEMVLMCHGFVAEETEEAIPAK
AMETLALLATELPLKKAAAMAAQIHDLKKNALYKAGLDAGL
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgtccctgcccccagcgctttatatcgttccgacccccataggcaacctgggagacatg
agcccgagggccgttgaaatcctccaatccgtgagtttgatagcctgcgaagacacccgc
cattcgggtcgactcttcagccattttggtatcagcacccgtaccacgtcggtgcacgat
cacaacgagcgtgcccgtgcccagtggattattgagaaactgagtcagggtgacgccgtg
gcgctggtgagtgatgcaggcacgccgctgatatctgaccccggctatcatctggtgtcc
caggtgcgtgaagctggatttgccgtgatccctttgccaggcccctgcgccgcgattact
gcgctcagtgcgtctggcctgccttccgaccgcttctcatttgagggcttcctgcctgcc
aaagacaagggccgcaacgataagctgactgcgctgcgggaagatccgcgcaccctgatt
ttttacgaatccccccaccgtattctgcaaacactcgaagccatagtggctgtgctgggt
ggcgaaaggcccatggtgatggcgcgggagctgaccaagaccttcgaaacttttttgagt
ggtactgcggccgaggtattggagaaggtaaagagtgatgacaatcagcaaaaaggtgag
atggtgctgatgtgccacggctttgtggccgaggaaactgaagaagccattccggccaag
gcgatggaaacactggcactactggccactgaattgccactgaaaaaggccgccgccatg
gctgcacaaattcatgatttgaagaaaaacgccctctataaagcgggtctggatgccgga
ttgtaa
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