Shewanella amazonensis: Sama_3571
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Entry
Sama_3571 CDS
T00445
Name
(GenBank) AMP-binding family protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
saz
Shewanella amazonensis
Pathway
saz00061
Fatty acid biosynthesis
saz00071
Fatty acid degradation
saz01100
Metabolic pathways
saz01212
Fatty acid metabolism
saz02024
Quorum sensing
saz04146
Peroxisome
Module
saz_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
saz00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Sama_3571
00071 Fatty acid degradation
Sama_3571
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Sama_3571
09145 Cellular community - prokaryotes
02024 Quorum sensing
Sama_3571
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
saz01004
]
Sama_3571
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
saz04147
]
Sama_3571
Enzymes [BR:
saz01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Sama_3571
Lipid biosynthesis proteins [BR:
saz01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Sama_3571
Exosome [BR:
saz04147
]
Exosomal proteins
Exosomal proteins of breast milk
Sama_3571
Exosomal proteins of breast cancer cells
Sama_3571
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
ABM01774
UniProt:
A1SBL7
LinkDB
All DBs
Position
complement(4206476..4208269)
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AA seq
597 aa
AA seq
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MSLEQFHLVRLLKAETQHNPDAIALKGFEMAAPWDAVSRKTFDHSSDSLAMQLIAGGLGV
QARVGIMSNNCPQWTVADVASLKARAVVVPIYPTSTLEQAAYILNDAEASWLFVDNAERY
GLACELRALCPQLKSIVVFDDAVTLAHGNDLHLSQLLMAVPDGEAAKELGVRLAQANLDD
LLTLIYTSGTTGEPKGVMLPHRAIASTIRQHDKRLAFTEGDVSLAFLPLSHIFERAWSFY
VLGRGGCNVYLTDTNRVKEAIAAVRPHTLCVVPRFLEKVYSAVQDKLSRAPASRKALFAW
AMSVGGRRFEVAQGRAKGGVLLSLQARLADKLVGRKIRDVLGGRLKFMPCGGAALNTDVG
AFFNAVNVPVLCGYGLTETTATVTCNTLDNRVPGSNGQCLPEVEIRIGENDEILVRGDTV
MTGYYKRPEDTASAFDNGWFKTGDAGRLDEAGNLFITDRIKELMKTSNGKYIAPQRVEGV
VGRCPFIEQVAVIADARNYVTALIVPAYEALEAWAREKGLKYESPLELIRHSHVLEHFEA
RLKLMQEGLAGFEQIKKFTLLPDAFTTESGLITPTLKLRRKVIYHKYQREISAMYGN
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgtcactcgagcaatttcatctggtcaggctgctcaaagccgagactcaacacaatccc
gatgccatcgccctgaaaggctttgaaatggccgctccctgggatgctgttagccgcaag
accttcgatcacagcagcgacagtctggcgatgcaattgattgccggtgggttgggcgtg
caggccagggtgggcattatgtcgaacaactgtccacagtggacggttgcggatgtggcc
tctctcaaggcccgcgccgtggtcgtgcccatctatcccaccagtaccctcgagcaggcg
gcttacatactcaatgatgccgaagccagttggctgtttgtggacaatgccgagcgctat
gggcttgcctgcgagctgcgtgccctgtgcccacagcttaagtcgatagtggtgtttgat
gacgctgtgacgcttgctcacggcaatgacctccacctgagccaacttttgatggctgtg
cccgatggcgaagcggccaaggagctgggagtccgcctggcgcaggccaatctggacgat
ttgctgacgcttatctacacctcgggcaccacaggggaacccaagggtgtgatgttaccc
catagagccatagcgtccaccattcgccagcacgacaaacgcctggcctttaccgaaggt
gatgtgtcgctggcgttcttgccactgagccatatttttgaacgtgcatggagtttttat
gtgcttgggcgcggcggctgcaatgtgtatctgaccgacaccaatcgcgtgaaagaagcc
atagcggcggtgcgccctcacaccctgtgcgtggtgcctcgcttccttgaaaaagtctac
agcgcggtgcaggacaagttgtcccgtgcgccggcatcccgtaaggccctgtttgcctgg
gccatgtcagtgggtgggcgccgctttgaggtggctcagggccgcgccaaaggtggcgtg
ctgttgtccctgcaggccagactggccgataagctggtgggccgcaagattcgtgatgtg
ctgggtggccgactcaaatttatgccctgtggcggcgcggcgcttaacaccgatgtgggc
gcatttttcaatgcggtaaacgtgcctgtgttatgtggctatggtctcaccgaaaccact
gccacggtaacctgcaataccctggataaccgggtacccggatctaacggtcagtgtttg
cccgaggtggaaatccgcatcggtgaaaacgatgaaatcctggttcgtggcgataccgtg
atgaccggctattacaagcgccccgaagatacagccagcgcctttgacaatggctggttt
aaaaccggtgatgccgggcgattggatgaggccggtaacctgtttattaccgatcgcatc
aaggagctgatgaagaccagtaacggcaaatatatcgcaccccagcgggtggaaggtgtt
gtggggcgttgcccctttatagagcaggtggcggtgattgccgatgcccgcaattatgtg
accgcgctgattgtgccggcctatgaggcgctggaggcctgggccagggaaaaagggctc
aagtacgaatccccattggagcttatccgccacagccacgtgctggagcactttgaagcc
cggcttaagctgatgcaggaagggttggcaggctttgaacaaatcaaaaagttcaccctg
ctgccagatgccttcacaacggaatctggcctgattactcctacgttaaagctgaggcgc
aaggtgatttatcataagtatcagcgggaaatcagtgccatgtatggcaactga
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