Stygiolobus azoricus: D1868_00265
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Entry
D1868_00265 CDS
T06313
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
sazo
Stygiolobus azoricus
Brite
KEGG Orthology (KO) [BR:
sazo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sazo03016
]
D1868_00265 (thpR)
Enzymes [BR:
sazo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
D1868_00265 (thpR)
Transfer RNA biogenesis [BR:
sazo03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
D1868_00265 (thpR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
QGR18582
UniProt:
A0A650CLF7
LinkDB
All DBs
Position
41825..42385
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AA seq
186 aa
AA seq
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MLRLFIALKIPQLPKIAEALEVLNRVGGDVKLVEPWNIHLTLVFLGELPENKVDLIKDSM
NAVSFNSFKVKFFGTGAFPNLNKPRVLWIGLSEGASELRKLRGELYKQLVSRGIRPEDEK
EFSPHLTLGRIKGPRGVVNLIQILNEYASTDFGEITVEEITLFKSTLTPKGPIYDPLYSV
KSVDRR
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
gtgttgaggctgtttattgcattaaaaatccctcaattacctaaaatagctgaggctctc
gaggttttgaacagagttgggggagacgttaagctcgttgagccttggaacattcactta
acactggtctttctcggggagttaccagaaaacaaagtagacctaataaaggactccatg
aacgccgtgtcttttaactctttcaaagtgaagtttttcggtaccggggcatttcctaat
cttaacaagcccagagtgttatggataggcttaagtgaaggggcaagtgaactcagaaag
ctcaggggtgaactatataaacagttggtatcaaggggaataagaccagaggacgaaaaa
gagttctctccacacctcactttaggaaggataaaaggacctagaggagttgttaatctg
attcaaatcctaaacgagtatgcaagtacagatttcggagaaattaccgtggaggagatc
accctcttcaaaagtacgttaactccaaaaggtcccatttacgatcctttatatagtgtg
aagagcgttgatagaagatga
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