Stygiolobus azoricus: D1868_02020
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Entry
D1868_02020 CDS
T06313
Name
(GenBank) transcription factor
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
sazo
Stygiolobus azoricus
Pathway
sazo03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sazo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
D1868_02020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sazo03021
]
D1868_02020
Transcription machinery [BR:
sazo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
D1868_02020
Prokaryotic type
Archaeal type
TFE
D1868_02020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
HTH_20
HTH_11
Rrf2
WSLR
Fe_dep_repress
IF2_N
HTH_PafC
TrmB
DnaD_N
GntR
Zn_ribbon_IS1595
F-93_WHD
Zn_Ribbon_TF
Sigma70_r3
HTH_9
HTH_IclR
HTH_DeoR
Zn_ribbon_Top1
HVO_2753_ZBP
DNA_ligase_ZBD
DUF1644
Zn_ribbon_ACC
Motif
Other DBs
NCBI-ProteinID:
QGR20469
UniProt:
A0A650CRL4
LinkDB
All DBs
Position
344842..345357
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AA seq
171 aa
AA seq
DB search
MLQLAKELVGEDAADLLKYLLKKRTEITDEELAKELNVKPNEVRKKLYLLSEQGFVTSRK
TKDKDSSLYIYYWKVNLDQINDVLLNRKRMILDKLKIRYEQEKDSLFYFCPQDNIKYTMD
EALENEFKCPKCGSVLQYYESEKARQFLGQKIKQLEDEIERETKRGKTNGS
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
atcttacaattagcgaaggaattggtcggtgaagatgcagctgatttattaaagtactta
ctaaagaaaagaacggaaataactgatgaggaactggctaaagaacttaacgttaaacct
aatgaggtaaggaaaaaactctatttactctctgagcagggttttgttactagcaggaaa
acaaaggacaaggactccagcttatatatttattattggaaggtaaatctagatcagata
aacgatgttcttttgaataggaagaggatgatacttgataagctaaagattaggtatgaa
caagaaaaagactcgttattctacttctgcccccaagataacataaagtatactatggac
gaggccttagagaatgagtttaagtgtcctaaatgcggaagcgttcttcagtattatgaa
tcagaaaaagctaggcagtttttaggacaaaaaattaaacagttagaagatgaaatagaa
agagagacaaaacgtgggaaaactaacggtagttga
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