Stygiolobus azoricus: D1868_02150
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Entry
D1868_02150 CDS
T06313
Name
(GenBank) exosome complex exonuclease Rrp41
KO
K11600
exosome complex component RRP41
Organism
sazo
Stygiolobus azoricus
Pathway
sazo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sazo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
D1868_02150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sazo03019
]
D1868_02150
Messenger RNA biogenesis [BR:
sazo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
D1868_02150
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
D1868_02150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-ProteinID:
QGR18904
UniProt:
A0A650CM00
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All DBs
Position
362447..363178
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AA seq
243 aa
AA seq
DB search
MMQVQKPRLILENGLRTDGRRPDEMRPIKIELGVLKNADGSAIFEMGNTKVLAAVYGPKE
MHPRHLALPDRASLRVRYHMTPFSTDERKNPAPSRREIELSKVIREALESTVLTELFPRT
VIDIFMEVLQADAGTRLVSLMAASMALADAGIPLRDLIAGVAVGKADGIIVLDLNEPEDM
WGEADMPIAMLPSLGQVALLQLNGNMTPEEFRKGLELAQKGINVVYNLQKDALRKKYAEY
KEE
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaagtgcagaagccaagactaatacttgaaaatgggctaaggactgacggtaga
agacctgacgagatgaggcccataaaaatagaattgggagtattgaaaaacgcagatggt
tcggctatttttgaaatgggtaatacgaaagtactagcggctgtttatggaccaaaggag
atgcatccaaggcatttagctttgccagatagggcatctttgagagtaagatatcatatg
acacctttttcgacagatgagaggaaaaatccggcacccagtagacgtgaaattgagtta
tctaaagttataagagaggccttagagtctacagtattaaccgaattatttccgagaaca
gttatagatatctttatggaagtcttacaagcagatgcaggaactaggttagtctctctt
atggcagcatcgatggctttagctgatgctggtatacctttgagggatttgatagcagga
gtggcagtaggaaaagccgatggaataatagttttagatcttaatgagccggaagatatg
tggggagaagctgatatgcctatcgcaatgcttccctctttaggacaagttgctttgctt
caacttaacggtaatatgactcctgaagagtttaggaaaggtcttgaacttgcacaaaaa
gggattaatgttgtttataatttacaaaaggatgctttgaggaagaagtatgcagaatat
aaggaggagtag
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