Stygiolobus azoricus: D1868_06610
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Entry
D1868_06610 CDS
T06313
Name
(GenBank) MBL fold metallo-hydrolase
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
sazo
Stygiolobus azoricus
Pathway
sazo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sazo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
D1868_06610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sazo03019
]
D1868_06610
Messenger RNA biogenesis [BR:
sazo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
D1868_06610
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_3
PDEase_II
Motif
Other DBs
NCBI-ProteinID:
QGR19699
UniProt:
A0A650CPD5
LinkDB
All DBs
Position
complement(1185444..1186733)
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AA seq
429 aa
AA seq
DB search
MSTLRPQLTLTEGSITLEIYGGYREIGGNCIVIKDRDKKIVFDNGIRFQVLRKYYRGSIR
PLGINELRSIGAIPPLNVFENIDALYISHFHLDHLGLLGALPPGTRVYVPSISILETIEE
WYRASSTWLAELPRKLHIEVIELIPHREDERGVTPIPVSHSAYPSYALVYNGYDKTIFYS
GDFRVSGPLGPRINTTDNIDRVLGSGSADIALLEGTNIGGIETPIGSEEFRSILNKVLMG
SGLAMISIDPLDFELLTAISELASLNGRTVVISSSRLVDILPQWLSSAFNANNLMLAVAS
DLEKPSLAPVDYVSLKHDVLKDPGGFLLVQEPIGFLEMLRRMRIWGEELPNGAIAILTTP
EPLEAEAEVEEKTLAYWLYMLGVHVYRIRLSGHYYPHELKNILNTVKPKKLIPIHTRHPS
LVLKLANSR
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
gtgtcaaccctgaggccgcaactgaccctaactgagggctcgataacccttgagatctat
ggtgggtatagagagattggtggaaactgtatagtcatcaaggatagagataagaagata
gttttcgataatggtatcagattccaggtccttaggaaatactatcgcgggagtatacgg
cctttaggcataaacgagctgagaagcattggtgccatacccccgctaaatgtgtttgag
aatatcgatgcactctacatatctcattttcatctagaccacctagggttgcttggagca
ctacctcccggaaccagggtctatgttccatcaataagcatactggagacgattgaggaa
tggtatagagcatcatctacatggctggcagaactgcctcgcaagctacatatagaggtt
attgagctaataccacaccgagaagacgagcgtggtgtaacacctataccagtaagccat
agtgcttacccttcctacgcactagtctacaatgggtatgacaagacgatattctatagt
ggtgacttccgagttagcgggccactaggccccagaattaataccacagataatatagat
agagttcttggctccgggagcgctgacattgctctattagagggcaccaatatagggggt
atagagacacctataggttctgaagaattcaggagcatactaaacaaggttctaatggga
agcggactagcgatgatctcaattgatcctctagacttcgaactactgacagcaatctca
gagctggcatcacttaacggcagaacagttgtcatatcatcctctaggctggtcgatatt
ctcccgcagtggcttagcagcgcattcaatgcgaataacttaatgctagctgtagcctct
gatctagagaagccatccctagcaccagtagactacgttagcctgaagcacgacgtgtta
aaggatccaggtggcttcctgctggtacaagagcccataggcttcttggagatgcttagg
cggatgaggatttggggagaggagctaccaaacggcgctatagcaatcctaaccacacca
gaacccttagaggctgaggcagaggtcgaggagaaaacccttgcatactggctatacatg
ctaggagtacatgtctacagaataaggctctccggacactattacccacacgaactaaaa
aacatactaaacacagtaaaaccgaagaagctaataccaatacacactaggcatccaagc
ctagtactcaaactagcaaatagtcgataa
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