KEGG   Stygiolobus azoricus: D1868_08175
Entry
D1868_08175       CDS       T06313                                 
Name
(GenBank) RNA-binding protein
  KO
K07573  exosome complex component CSL4
Organism
sazo  Stygiolobus azoricus
Pathway
sazo03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sazo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    D1868_08175
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sazo03019]
    D1868_08175
Messenger RNA biogenesis [BR:sazo03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     D1868_08175
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     D1868_08175
SSDB
Motif
Pfam: ECR1_N Zn_ribbon_3 FtrD-like EXOSC1 Zn_ribbon_NUD Zn_Ribbon_TF S1 HVO_2753_ZBP DZR ECR1_N_2 Zn_Tnp_IS91 HypA Cas12f1-like_TNB Prok-RING_1 DUF3797 DUF7117 Zn_ribbon_NOB1 DUF7130 A2L_zn_ribbon DUF7129 Zn_ribbon_8 Zn_ribbon_TiaS Zn_ribbon_LysW Zn_Ribbon_YjdM Zn_ribbon_RPAB4
Other DBs
NCBI-ProteinID: QGR20543
UniProt: A0A650CRZ2
LinkDB
Position
complement(1480038..1480604)
AA seq 188 aa
MRKQGELLLPGDELNVLEEFVPSEGTYEKDGKVYSSVVGKAFYDMINRKVNSIAFKRPGI
VMIKKAKYVLGIVVGLKEDSALVNIYSIEDKQTESITGYLHISQINNKYLNSISEAVKVG
DIIRAKPLNSTIPIALTLKQRDLGVVYAKCSICGTKMTKHDEEHLRCPNCGNIESRKIAL
LQVKKGGS
NT seq 567 nt   +upstreamnt  +downstreamnt
ttgagaaagcaaggagaattattgttaccgggtgacgagttgaatgtattggaggaattc
gtaccgagcgaagggacttacgagaaggacggaaaggtttactccagtgtcgtagggaaa
gcgttttacgatatgataaatagaaaggtaaattcgatcgcctttaagagacctggaatt
gttatgataaaaaaggcgaagtatgtgctaggaattgtagttgggcttaaggaagactca
gccctagtaaacatttatagtattgaggataaacagacagagtctattacaggttaccta
catatttctcagataaataacaagtacttaaactcgatatccgaagctgttaaggtcgga
gatataataagggctaagcccttaaactccacaatccctatagcgttaactctaaaacag
agggatctgggtgttgtttacgctaaatgctcgatatgcggtactaaaatgactaaacat
gacgaagaacatttaaggtgccccaactgtggtaatattgagtctagaaaaatagctcta
cttcaggtgaagaaaggtggaagttaa

DBGET integrated database retrieval system