Stygiolobus azoricus: D1868_08270
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Entry
D1868_08270 CDS
T06313
Name
(GenBank) DEAD/DEAH box helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
sazo
Stygiolobus azoricus
Pathway
sazo03022
Basal transcription factors
sazo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sazo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
D1868_08270
09124 Replication and repair
03420 Nucleotide excision repair
D1868_08270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sazo03021
]
D1868_08270
03036 Chromosome and associated proteins [BR:
sazo03036
]
D1868_08270
03400 DNA repair and recombination proteins [BR:
sazo03400
]
D1868_08270
Enzymes [BR:
sazo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
D1868_08270
Transcription machinery [BR:
sazo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
D1868_08270
Chromosome and associated proteins [BR:
sazo03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
D1868_08270
DNA repair and recombination proteins [BR:
sazo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
D1868_08270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
ResIII
DEAD
PhoH
Cob_adeno_trans
Phage_Nu1
Motif
Other DBs
NCBI-ProteinID:
QGR20544
UniProt:
A0A650CRR7
LinkDB
All DBs
Position
1495440..1497095
Genome browser
AA seq
551 aa
AA seq
DB search
MELREWQKKLKEKIKSAINNNKLVFLNSPTGSGKTLFSLLVGLETKGKVLFLVRTHNEYN
PVFRDFLKINTDKNLKFSFLMGKPTACLFSEGDASTDDINCNLCSFKTSIIDLEVEKYPN
EFVKELKKQGIEEGFCPYFSLFNDIGKADVIVLTYPYFFIDKFRESLGIEFEDYLIVVDE
AHNVEKIGDFEERTLSSHLLDMAIKQAKNEFVKFILQRIKDELIRIASNVESYIRANEIP
EISDDEIEVLKEEYEELREQMIKERKIKRIYLGSVIKFYESYKDDEELVPFIHKNKIVLK
SVDISNFLQILNDDNLTFLLMSGTLPPEDYIKKIWNITRSLIYINVEREIKEKVSGDYEC
ILATDVTSKYDSRGDVMWKKYGDYLLKVYYQAKAHVLSVFPSYEIMNKVMGFIQVPKYLE
DEDSEIETLYSFVQKFNKTIIGAVGRGKLTEGVELVKDGRSLISDVVIVGIPYPPPDDYT
KLVAQKISERLGRKIDEYLYKIPALMTVRQSIGRGIRGINDHVKVWLLDRRFDSLWWKKN
LNCFNPKKTRL
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atagagctaagagagtggcaaaagaaactaaaagaaaaaattaagagtgctattaacaac
aataagctggtatttttaaactccccgacagggagtgggaagacattattttctctttta
gtaggacttgaaacaaaaggtaaggttcttttcttagtaagaacacacaacgaatataac
cccgttttcagggatttcctgaaaattaacactgataaaaacctgaaattctcattcctc
atgggaaaacctaccgcttgtttattttccgaaggggatgcaagcacagatgatataaac
tgtaacttatgcagttttaaaacttctattatagatctagaagtggaaaaatatcccaat
gaatttgttaaggagttaaaaaaacaaggtattgaagaagggttttgcccttatttctct
ctttttaacgacataggtaaagccgacgtaatagtccttacatatccttactttttcata
gacaagttcagggaatctttaggtatagaatttgaggattatttaatagtagtggatgaa
gctcataatgtcgaaaaaataggggattttgaagagagaacgctctcaagccatttactc
gatatggctataaaacaagccaaaaatgagtttgttaagttcatattgcagagaataaag
gacgagttaattagaatagcttctaatgtagagagttacattagagcgaatgagattcct
gaaatctcagatgatgaaatagaggttctcaaagaagagtatgaagaactaagagagcaa
atgataaaggagaggaaaataaaaaggatatatttgggttctgtaattaaattctatgaa
agctacaaagatgatgaagaactagtaccttttattcataaaaataaaatagttctgaag
agcgttgatatatcaaatttcttgcaaatactaaacgatgataacctaacatttctatta
atgtctggaactcttccacctgaagattatatcaaaaagatctggaatataacgaggagt
ttaatttatattaacgtcgagagggaaattaaggaaaaagtgtctggtgattatgaatgt
attctagcaaccgatgtaacttctaaatacgacagtagaggagacgtaatgtggaaaaaa
tatggagattacttgctaaaagtgtattatcaagctaaggctcacgtgttatctgtattt
ccctcatatgagataatgaataaggtgatggggtttatacaagtgccaaaatacttagaa
gatgaggactccgaaatagagacattatactcgtttgtacaaaaattcaacaagactata
ataggggcagtaggtagggggaaactgacggaaggggtagaacttgtgaaagacgggagg
agtttgatcagtgacgttgtgatagtgggaattccatatccgccaccagacgattatact
aagttagttgctcaaaaaatatcggaaagattaggaagaaaaattgatgagtacctttac
aaaatccccgcattaatgactgtgagacaatccataggaagggggattagaggaattaat
gatcatgtaaaagtatggctcttagacagaaggttcgacagcttatggtggaagaaaaac
ctaaattgcttcaatccaaaaaagactcgattatga
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