Salinimicrobium sp. 3283s: VS868_00035
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Entry
VS868_00035 CDS
T10578
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
sazs Salinimicrobium sp. 3283s
Pathway
sazs00300
Lysine biosynthesis
sazs00470
D-Amino acid metabolism
sazs01100
Metabolic pathways
sazs01110
Biosynthesis of secondary metabolites
sazs01120
Microbial metabolism in diverse environments
sazs01230
Biosynthesis of amino acids
Module
sazs_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
sazs00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
VS868_00035 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
VS868_00035 (dapF)
Enzymes [BR:
sazs01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
VS868_00035 (dapF)
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Ortholog
Paralog
GFIT
Motif
Pfam:
DAP_epimerase
Pro_racemase
CntK_N
Motif
Other DBs
NCBI-ProteinID:
WZL89170
LinkDB
All DBs
Position
complement(5118..5906)
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AA seq
262 aa
AA seq
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MKLNFYKYQGTGNDFIMVDNRTSVLSKNDTKLIRRLCDRKFGIGADGLILLENSENSQDD
FKMVYFNADGNESSMCGNGGRCLVAFAKYLGIISDRAAFTAIDGFHEAVIEDEKVGLKMM
DVEGVSEIGNALFLNTGSPHHVIFSEEVDQINVKQEGAAVRYSPEYEAKGGTNVNFSSSL
DESTLKVRTYERGVEDETLSCGTGVTAVAIAAYHSGRISSNKVELKTPGGELSVRFTPRG
GSYSDVWLTGPAQQVFKGEITC
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgaatttttataaataccagggtacgggaaacgattttattatggtagataac
cgtacatcggttttatccaaaaatgataccaaattgataagacggctttgtgatcgcaaa
tttggcattggtgcagacggtctcattctccttgaaaattcagaaaattcgcaggatgat
tttaagatggtgtacttcaacgccgatggcaacgaaagtagtatgtgtggtaacggcggc
aggtgtcttgtagcgtttgcgaaatatttaggaattatttcagacagggcggcatttact
gcaatagatggatttcatgaagctgtaatagaagatgaaaaggtgggacttaaaatgatg
gatgttgaaggggtttctgaaattggcaatgctcttttccttaatacaggctccccgcat
catgtcattttttcagaagaagtagaccagattaatgtcaaacaagaaggagctgccgta
aggtattcaccagaatatgaggctaagggaggcaccaatgtaaatttctcttcatctctg
gatgagtcaactttaaaagtgcgtacgtatgagaggggagtggaagatgaaactctttcc
tgcggtacgggggttacagctgtcgctatcgccgcctatcactccggaagaatatcttca
aataaagtagagttaaaaacgccggggggtgaacttagcgttcgttttacgcctaggggt
ggcagttacagtgatgtttggctaaccgggcctgcacaacaggtctttaaaggagaaata
acatgttaa
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