Salinimicrobium sp. 3283s: VS868_07840
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Entry
VS868_07840 CDS
T10578
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
sazs Salinimicrobium sp. 3283s
Pathway
sazs03410
Base excision repair
sazs03430
Mismatch repair
sazs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sazs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
VS868_07840 (recJ)
03430 Mismatch repair
VS868_07840 (recJ)
03440 Homologous recombination
VS868_07840 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sazs03400
]
VS868_07840 (recJ)
DNA repair and recombination proteins [BR:
sazs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
VS868_07840 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
VS868_07840 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
VS868_07840 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
AA_permease_N
Motif
Other DBs
NCBI-ProteinID:
WZL90655
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Position
1784350..1786047
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AA seq
565 aa
AA seq
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MRWTLKPKPDPSTVEHLQEALGVEKPIASLLVQRGIETFEEAKKFFRPSLEDLHDPFLMK
DMEAAVSRIELALQKGENIMVFGDYDVDGTTSVALVSSYLKRIYPNVATYIPDRYEEGYG
VSYKGIDFAADNDISLIIALDCGIKAIEKVAYASEKGIDFVICDHHRPGAEIPKAVAVLD
PKREDCEYPYKELCGCGVGFKLLQALNQKRGEPFGVLIPYLDLVATAIGADIVPVTGENR
ILAYHGLQVINVAPRAGIGAILEQVKKEQLTLTDVVFIVAPRINAAGRMKHGLHAVNLLT
EEDSVQAKIFAAEIEEYNTSRRETDKVITEEALAQIDELCEQERKTTVVYRETWHKGVIG
IVASRLTETYYRPTLVFTRSGEKLAASARSVSGFDVYDALEGCSEFIEQFGGHKYAAGLT
LLSHQYENFKRKFEEVVSATIDPRLLTPEIQIDAEIELGDITDKFHRILKQFAPFGPGNM
SPVFMSKNLRDTGYARCVGGDDRHLKARFYQKGNDRSYGAIGFDLGKKCELVSEGKKVKA
AYCIEENEFQGNITLQLKLKDVEVN
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgcgctggacacttaaacctaaacccgatccttcaacagttgaacatctgcaggaagct
ttaggtgtagaaaaaccaatagcttcattgctggttcagcgcggcatagaaacatttgaa
gaagccaaaaagttctttcgccccagtcttgaagacctccacgatccttttctaatgaaa
gatatggaagcagcggtaagcaggattgagcttgcccttcaaaaaggggaaaatatcatg
gtctttggagattatgatgtagacggcaccacgagtgtggcattggtttcttcttatcta
aaaaggatctacccaaacgttgcgacctatatccccgaccggtatgaagaaggatacggt
gtgtcttataaagggatagattttgcagccgataatgacattagcctcatcattgccctc
gattgcggaattaaagctattgaaaaagtagcctatgccagtgaaaagggcattgacttt
gtaatttgtgatcatcacaggccgggggcagaaataccaaaggcggtagctgtactggat
cctaaaagagaagattgtgaatacccttataaggaactctgcggatgtggtgtgggcttc
aagctgttgcaggctctaaaccaaaagcggggagagccatttggagtgctcatcccatac
ctggacctggttgctacagctattggggccgatatagtgccggtaaccggcgaaaaccgg
atacttgcctatcatggcctgcaggtaataaatgttgctccccgtgcaggaattggtgcg
atcctcgaacaggtgaagaaggaacaactcacccttacagatgtggtttttatagttgcg
ccccgcatcaatgcagccggaaggatgaagcacggactacacgccgttaacctgcttact
gaagaagatagtgtgcaggcaaaaatatttgcagccgaaattgaagaatacaacacgagc
cgaagagagacagataaagtaattactgaagaagcacttgcccagattgacgaactttgc
gaacaggagagaaagaccacagtagtttaccgggagacctggcataaaggggtgataggg
attgtagcctcgaggcttaccgaaacttattaccgccctaccctggtgtttacccgcagc
ggtgaaaaacttgcggcatcggcacgttctgtcagtggttttgatgtttatgatgctttg
gaaggctgcagtgaattcattgaacaatttggaggtcataaatatgcggcgggcttaaca
ctgctctctcaccagtatgagaatttcaagagaaaatttgaagaagtggtttcggctaca
atagatccccgcttgctaactcccgaaattcagatcgatgccgaaatagaactcggtgat
attacagataagttccataggatccttaaacagtttgcaccatttggacccggcaatatg
tctcctgtttttatgtcaaaaaatttgcgggatacaggttacgcccgctgtgtaggtgga
gatgacaggcacctcaaagctaggttttatcagaaaggaaatgatcgcagctatggtgcc
ataggttttgatttggggaagaagtgcgagctggtaagtgaagggaaaaaggtcaaggct
gcctattgtatcgaagagaatgaatttcaaggcaatatcacgctacagctaaaattgaaa
gacgttgaggtaaattag
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