Salinimicrobium sp. 3283s: VS868_09315
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Entry
VS868_09315 CDS
T10578
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
sazs Salinimicrobium sp. 3283s
Brite
KEGG Orthology (KO) [BR:
sazs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sazs03009
]
VS868_09315
Enzymes [BR:
sazs01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
VS868_09315
Ribosome biogenesis [BR:
sazs03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
VS868_09315
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
WZL87808
LinkDB
All DBs
Position
2100282..2101190
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AA seq
302 aa
AA seq
DB search
MSRNDRSSGSRGDRSSNKTSSGRQGGAGRTKSHYRGNAPVSRDEKDPKNMSRGNAPVKKK
QGGAGKSDGMRLNKYIANSGICSRRDADIYIAAGNVTVNGKVVTEMGHKVQISDEVKFDG
RRVNPEKPEYILLNKPKGFYVTGSLEKKNRTVMDLVANASKSKLTPVGKLDTQATGLLLF
TNDGTLAKNLANPKNGIRQIYHLELDKDLAYDDLQKIKEGVNLEDGTAKVTEVSYVENKP
KREVGLEIKSTKAHIVQRIFKSLGYEIVKLDRVVYGGLTKKDLTRGHWRVLSQQEVINLS
NL
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgagtagaaatgacaggtcatccggaagcaggggagaccgctcttccaataagacgagt
agcggaagacagggcggtgctggccgtaccaagtcccattaccgcggaaatgctccggta
agccgagatgaaaaggatcctaagaacatgtcccgtggcaatgcccccgtaaagaagaaa
cagggcggggccggaaaaagtgatgggatgaggctgaataagtatattgccaattctggc
atctgctccaggagagatgccgatatctatattgctgccggaaatgttacggtaaatgga
aaagtggtgaccgaaatgggacacaaagtacagatctctgatgaggtgaagtttgacggc
cgccgcgttaaccccgaaaaacctgagtacatccttttaaacaagcctaaaggtttttac
gtaaccggaagtcttgagaaaaagaacagaacggtgatggatcttgtagcaaatgcttca
aaatcaaagcttactcctgttgggaaactggatacccaggccacaggtttgttgctgttt
accaacgatggtaccctggcaaagaaccttgcaaatccaaagaatgggataaggcaaata
tatcatcttgagctggataaagatttggcatatgatgatcttcagaagataaaagaaggt
gtaaacctggaagacggtactgcaaaagtcaccgaagtgagttatgtggagaacaaacca
aaaagggaggtaggccttgaaattaaaagtactaaagcccatattgtgcagcgtatattt
aaaagtcttgggtacgaaatagtaaaacttgaccgtgtagtctacggcggattgaccaaa
aaagaccttacccgtggccactggagagtattgagtcagcaggaggtgatcaacctttct
aatctctga
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