Salinimicrobium sp. 3283s: VS868_10495
Help
Entry
VS868_10495 CDS
T10578
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
sazs Salinimicrobium sp. 3283s
Pathway
sazs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sazs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
VS868_10495 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sazs03021
]
VS868_10495 (rho)
03019 Messenger RNA biogenesis [BR:
sazs03019
]
VS868_10495 (rho)
Transcription machinery [BR:
sazs03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
VS868_10495 (rho)
Messenger RNA biogenesis [BR:
sazs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
VS868_10495 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
NACHT
AAA_25
AAA
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WZL88028
LinkDB
All DBs
Position
complement(2358926..2360662)
Genome browser
AA seq
578 aa
AA seq
DB search
MFEISELKAKKLPELQEIAKTLQVPKYRTQKKLDLVYKILDYQAANPQKVQEVLTDEEGK
PQSQEDQNTARKQRKTRPRKEKSSTAKNPADQRPVSEKKADHKGEQKEKSQEAKPSSDNR
NEQKGKKEDSSRQQTSKDSSSRNQQKDRKDTRQKDARDNRNQNRDNTRDNSNRDNNGNRD
NSGNRDSGNRDTGNRDNRNRYKEPDYEFDAIIESEGVLDIMQDGYGFLRSSDYMYLSSPD
DIYVSQSQIRLFGLKTGDTVLGQVRPPKEGEKYFPLIKISKINGLDPQVVRDRVSFEHLT
PLFPQEKFNIAERQSTVSTRVIDMFSPIGKGQRGMIVSQPKTGKTMLLKDIANAIAANHP
EVYQIILLIDERPEEVTDMQRNVKGEVIASTFDKEAHEHVRVANIVLEKAKRMVECGHDV
VILLDSITRLARAYNTVQPASGKVLSGGVDANALHKPKRFFGAARNIEGGGSLSIIATAL
TETGSKMDEVIFEEFKGTGNMELQLDRKIANRRIFPAIDLTSSSTRRDDILLDENTLQRM
WVMRKYLADMNPVEAMEFINGRITQTKNNEEFLISMNG
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaaatttcagaattaaaggctaagaagctgcctgaacttcaggaaatagccaaa
acgctacaggtaccaaaataccgtacgcagaaaaagcttgacctggtatacaaaatcctt
gattatcaggcggccaatccgcaaaaagttcaggaggtactgacagatgaagagggaaaa
cctcaatcccaggaagaccaaaatactgccaggaaacagcgaaaaacccgccccagaaaa
gaaaaatccagtactgcaaaaaatccagcagaccaacgaccggtctctgagaaaaaagca
gatcacaaaggagaacaaaaagaaaagtcacaggaagcaaaaccttcatctgacaacagg
aatgagcagaaaggaaagaaagaagattcttcccgccagcaaacttctaaagattcttct
tcgcgaaatcaacaaaaagaccgcaaagataccaggcagaaagatgcacgggataaccgc
aaccaaaatcgtgacaatacccgcgacaatagcaaccgcgacaacaacgggaacagagac
aactcaggcaaccgcgacagcgggaacagagatacaggaaaccgcgataacagaaatcgt
tataaagaacccgattacgagtttgatgcaattatagaaagtgaaggagtacttgatatc
atgcaggacggatatggcttccttaggtcatcagactacatgtacctctcttctccagat
gatatttatgtttctcaatcccagataagattgtttggacttaagaccggtgataccgtt
cttggccaggtaagacctccaaaagagggagagaaatattttccgcttatcaagattagc
aagatcaatggtcttgatccacaagtagtgagagaccgggtttcttttgaacaccttact
ccacttttccctcaggaaaaattcaacattgccgaaagacaaagcacagtttctaccagg
gttattgacatgttctctcctataggaaaaggacaaagaggaatgatcgtttcccagcca
aaaacaggtaaaaccatgctcctaaaggatattgcaaatgcaattgctgcaaatcatcct
gaagtatatcaaattatcctgcttattgatgaacgtcctgaagaggtaaccgatatgcag
cgtaatgtaaaaggagaagtaatagcttcaacttttgacaaggaagctcacgaacacgta
cgtgttgcaaacattgtgcttgaaaaagccaagagaatggtagaatgtggtcatgatgta
gtgatccttctggattccatcacccgtttagccagagcatataatacagtacaacctgcc
agcggaaaagtactttctggaggtgttgatgcaaatgcgcttcacaagcctaaaagattc
tttggtgcagcacgaaatattgaaggaggcggatctctttcaataatcgccacagcactt
accgaaacaggctctaaaatggacgaggtgatctttgaagaattcaaaggtaccggtaac
atggaacttcaattagacaggaaaattgccaatagaagaattttcccagccattgacctt
acctcttccagtacaagaagagatgatatcctgcttgacgagaacacacttcaaagaatg
tgggtaatgcgcaagtatctggccgacatgaaccctgtggaagccatggaatttatcaat
ggccgtattacacaaacaaagaacaacgaggagtttttaatctccatgaacggttaa
DBGET
integrated database retrieval system
