Salinimicrobium sp. 3283s: VS868_13065
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Entry
VS868_13065 CDS
T10578
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
sazs Salinimicrobium sp. 3283s
Brite
KEGG Orthology (KO) [BR:
sazs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sazs03009
]
VS868_13065 (rimO)
Enzymes [BR:
sazs01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
VS868_13065 (rimO)
Ribosome biogenesis [BR:
sazs03009
]
Prokaryotic type
ribosomal protein modification factors
VS868_13065 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
TMF_TATA_bd
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
WZL88525
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All DBs
Position
2938514..2939860
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AA seq
448 aa
AA seq
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MRTKSLKKNRINVVTLGCSKNVYDSEVLMGQLKANNKDVVHEQEGNIVVINTCGFIDNAK
EQSVNTILEYVELKEQGEVDKVFVTGCLSERYKPDLVKEIPDVDQYFGTTELPELLAALE
ADYKHELIGERLTTTPKNYAYLKIAEGCDRPCSFCAIPLMRGKHKSTPIENLVAEAKKLA
AQGVKELILIAQDLTYYGLDLYKKRNLAELLENLVKVEGIDWIRLHYAFPTGFPMDVLEV
MKREPKVCNYLDIPLQHVSDDLLKSMRRGTTHEKTTNLLKEFRAKVPEMAIRTTLIVGYP
GETEAHFEELKQWVKDMRFERLGCFTYSHEENTHAYNLEDDVPQEVKQERANEIMEIQSQ
ISWELNQQKIGQTFNVVIDRKEGENYVGRTEHDSPDVDNEVLIDATKIYLKTGEFYEVKI
TDAADFDLFGEPVNVNIEKPKRKVLFNQ
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgagaacaaagtcattaaaaaagaacaggatcaacgtggtcacccttggctgcagtaag
aacgtctacgacagcgaggtgcttatgggccagctgaaggcgaacaacaaagatgtggtg
catgagcaggaggggaatatcgtggtgatcaacacctgtggctttattgacaatgcaaaa
gagcagtctgtaaacaccattttagagtatgtagagctgaaggagcagggagaagttgat
aaggtttttgttaccggatgccttagcgagcgctacaaacccgatcttgtaaaagagatt
cctgatgttgaccagtatttcggaaccaccgaacttcctgaactgcttgctgctcttgaa
gccgattacaagcacgaacttattggggaacgtttaaccacgactccaaagaattacgct
tacctcaagatcgccgaaggttgtgatcgtccctgttctttttgtgcgattccgcttatg
cgcgggaaacataaatccactcccattgaaaatttggtggcagaagctaaaaaactcgcc
gctcagggtgtgaaagagcttattcttattgcgcaggatcttacatattacggacttgat
ctttataaaaaacgaaacctggccgaacttcttgaaaacctggtgaaggtggagggaatt
gattggatcaggttgcactacgctttcccaacaggttttcctatggatgtactggaggtg
atgaagcgggagcctaaggtttgtaattatctggatattccgttgcagcatgtttctgat
gatttgctgaagtctatgcgccgcggaaccacccatgaaaaaacaacgaatttactgaag
gaattccgtgctaaggtgccagaaatggcaattagaacgactcttattgttggatatccc
ggagaaactgaagctcattttgaagaactgaagcagtgggtgaaagacatgcgttttgag
cgcctgggctgtttcacctattcgcacgaagaaaatacgcacgcttacaatcttgaagat
gatgtgccgcaggaagtaaagcaggagagagctaacgagatcatggaaattcagtcgcag
atctcctgggaactgaatcagcagaaaatagggcagaccttcaacgttgttatcgaccgc
aaagaaggcgaaaactacgtgggaagaaccgaacatgattcccccgatgttgataatgaa
gtgctgatcgatgctaccaaaatatacctgaagacaggagagttctacgaagtaaagatc
acagatgccgccgattttgacctttttggagaaccggtgaatgtgaatatcgagaagcct
aagcggaaggtgctttttaatcagtaa
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