Salinimicrobium sp. 3283s: VS868_15340
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Entry
VS868_15340 CDS
T10578
Name
(GenBank) putative LPS assembly protein LptD
Organism
sazs Salinimicrobium sp. 3283s
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LptD_2
DUF7223
Motif
Other DBs
NCBI-ProteinID:
WZL88958
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Position
complement(3457787..3460489)
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AA seq
900 aa
AA seq
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MRTKILYILSCCIFTLSLATKSAAQEIKTNEGIRIPAEREPVQPIMDSVRIEAPVPVITL
TRKDSIKPKKEILADRVTYTAEDYMRLSPRENRIYLYNNAEITYGDINITAGRIVLDNET
NEVYAYGIIDTAGVYTQKPVFTQAQSVVRPDSIRFNFDSKKALVFNSRTEQGEFKVLGEI
TKRENDSVYYMKNVKFTTSPNEENPDYYFYARRIKLVPDKKIVSGLVNMYIADVPTPLGL
PFGYFPMTDEQTSGFIIPSFGDDNNRGFYLQNGGYYFAISDYVDLTVLGDYYTNGSYGLR
MESSYAVRYRFRGNLSFRYEKLINSERGFPDFSESTIYNLRWNHSQDSKANPSSRFSASV
NLGSSDYYQASTNQMNTGNRLTNTLSSSVSYSKTFNIQPQINLSIAATHSQNTNTEKINM
TLPTVQASMARVYPFEPKVGAKKGIIENINFQYNFRGENRFQTTDSLFFKPEMFEDAILG
AQHSIPLTTNFKLFNYLSVSAGTNYTESWVFRTYDRSYDEEARREIVDTVRGFDSFRTYN
FNTSIGTTIYGTKNFSGKGKYQAIRHVMRPSISYNINPGFEHYYDEYIIPESEDREERVV
EYSRFQGSLYGPPGKLFSSSIGFSLSNTFEAKVKDSADAEPRKVKLLNNLNISTSYNLAG
DSLKLSPISVRGSLPVIQNKLDINFGANLDVYALNNENRRIDKLNIQNGGSLFRLTNANM
SFGYSFSSRDFSGGKENVNRLENQTFRNGGRPDDLFGKDMDIDGSFYDEHEADMAEEEEE
AESENSWYNFNIPWDLRLAYTLNYSNSARQNDISSHSLMFSGDVELSPKWTVGASSGYDF
VNTGFTHTQLRFARDLESWRMTFSWTPFGVYKQWNFFIGIKSSLLRDIKYEKRRERDRRL
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
ttgcgaacaaagatactttacatactttcctgctgtattttcacgctttctttagccacg
aaatctgcagcacaggaaatcaagacgaatgaaggtatccgcattcccgctgaacgtgag
cctgtgcagcctataatggattctgtgaggattgaagcacctgttcccgtcatcacgctt
acccgtaaggacagcattaaaccaaaaaaagaaatcctggcagacagagtgacttacact
gccgaagattacatgcgccttagcccgagggaaaacaggatatacctatataataatgcc
gaaataacttatggcgacatcaatataaccgccggaaggattgtactcgacaatgagacc
aacgaggtctatgcctacggaataattgataccgcaggagtttacacgcaaaaaccggta
tttacccaggcacagagcgtagtgcgaccagattctatcaggttcaactttgattcgaaa
aaagctctcgtctttaattcccgaaccgaacagggggaatttaaagtgctgggagagatc
acaaaacgtgagaatgactcggtgtactacatgaaaaatgtaaaattcaccacctctcca
aatgaagaaaatcccgattactatttctacgccagaaggatcaagttagttcctgataaa
aaaatcgtttcgggccttgtgaacatgtacatcgccgatgtacccacaccacttggtttg
ccttttgggtatttccctatgaccgacgagcagacttccggatttataattccatctttt
ggggacgataacaaccgcggattttacctgcaaaacggtgggtattactttgccataagc
gattacgtcgatctaaccgtgctgggtgattactataccaacgggagttacgggttaaga
atggagtcttcttatgccgtgcgatacaggtttagaggaaaccttagctttagatatgaa
aagctgataaacagtgaaagaggttttcccgatttttctgaatcaaccatttacaacctt
cggtggaaccactcccaggattcaaaggctaacccttcttcgagattctcggcatctgta
aaccttggaagcagcgattactaccaggcatctaccaatcaaatgaacacaggaaacagg
ctaaccaataccctgagttcttcggtctcttattcaaagacctttaatattcagccgcaa
atcaacctgagtattgctgccacgcacagccagaacaccaatactgaaaagataaacatg
accctgccaacagtgcaggcgagcatggcccgggtctaccctttcgagccaaaggtaggt
gccaaaaaaggcattattgagaacattaattttcagtataattttagaggagagaacagg
tttcaaaccaccgattcccttttcttcaaaccagagatgttcgaagatgccattttaggg
gcccagcattccattcctcttaccacaaactttaaattgttcaactatttaagtgttagt
gccggaacaaattatactgaatcatgggttttcagaacatatgaccgctcatatgatgaa
gaagcccgaagagaaattgttgataccgtgaggggctttgattcctttcgcacctataac
ttcaacaccagcataggtaccacgatctacggaacaaagaattttagcggaaaggggaaa
tatcaggcaattcggcacgtaatgcgcccttcgataagctataatataaatcctgggttt
gagcattattacgacgaatatatcattccggaatctgaagaccgggaagagcgtgtggta
gaatattcaaggttccagggctctctgtacgggcctcccggaaagctgttttccagctct
atcggcttctctttgagcaacactttcgaggcaaaggtaaaagattcggccgatgccgaa
cccagaaaagtaaagctgcttaataacctgaacattagcacttcatataatttagcagga
gattcactaaaactctctcctattagcgtacgcggaagtcttccggtgattcaaaacaaa
ctggacataaactttggggccaacctggatgtttatgcgctgaataatgagaaccggcgt
attgataaactgaacattcaaaatggcggaagtctcttcaggcttaccaatgctaatatg
agctttggatattccttctccagccgcgatttttcaggaggaaaagagaacgtaaaccgg
ctcgaaaatcagaccttcagaaatggcgggcgtccagatgacctttttggaaaggatatg
gacatagatggttctttttacgacgaacatgaagccgatatggccgaagaagaagaggaa
gcagaaagcgagaacagctggtacaacttcaatattccctgggacctgcgccttgcatat
acccttaactatagtaacagtgccaggcagaacgatatttcctctcattccctcatgttc
tcgggagacgttgaactttcccctaaatggacggtaggtgcctcctcgggttatgatttt
gtgaataccggcttcacccatacacagttgagatttgcgagggacctggaaagctggaga
atgacctttagctggacgcctttcggggtttacaagcagtggaactttttcatcggaatc
aagtcttctctgttgagagatatcaagtacgaaaagagaagggaaagagacagaagatta
taa
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