Entry |
|
Name |
(GenBank) Uracil-DNA glycosylase
|
KO |
|
Organism |
sba Sulfurospirillum barnesii
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:sba00001]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Sulba_0008
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:sba03400]
Sulba_0008
Enzymes [BR:sba01000]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Sulba_0008
DNA repair and recombination proteins [BR:sba03400]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Sulba_0008
Prokaryotic type
Sulba_0008
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
8183..8857
|
AA seq |
224 aa
MIDPKIEESWKKVLLEEFQKPYFETLKTFLVEEKKSHTIYPSGANIFAAFNHTPFENVEV
VILGQDPYHGAGQAHGLSFSVQEGVPHPPSLQNIFKELRDDLGCAIPKNGTLSAWAKQGV
FLLNTVLTVRASEANSHRNQGWENFTDTVIKLLSAQKEHLVFILWGSPAGAKASLIDGKK
HLILKAPHPSPLSSYRGFFGSKPFSKSNEYLVSKGKKPIEWCLA |
NT seq |
675 nt +upstreamnt +downstreamnt
atgatagacccaaaaattgaagagagttggaaaaaagttctgttggaagagtttcaaaaa
ccctattttgaaacgctgaaaacttttttagtggaagaaaaaaaatcacatacaatttat
cccagcggggcgaatatctttgcagcgtttaatcatactccttttgaaaacgttgaagtg
gttattttagggcaagacccctatcatggtgcagggcaagcacatgggctttcattttcg
gtgcaagaaggggtacctcatccaccctcgttgcaaaatatttttaaagagttacgggat
gatttggggtgtgccattcccaaaaatggtacgctaagcgcatgggcaaaacaaggtgtt
tttttactcaataccgttttaaccgtgcgtgcaagtgaggccaattcacaccgcaatcaa
ggctgggaaaattttaccgacacggtgattaagcttttaagcgctcaaaaagagcatctg
gtttttattctttggggaagtccagcaggtgcaaaagccagccttattgatggtaaaaaa
catctcattttaaaagcacctcacccctcaccgctctcttcgtaccgtggtttttttggc
tcaaaaccgttttcaaaaagcaacgaataccttgtttctaaaggtaaaaaaccgattgag
tggtgtttggcttga |