Sulfurospirillum barnesii: Sulba_0064
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Entry
Sulba_0064 CDS
T02139
Name
(GenBank) exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
sba
Sulfurospirillum barnesii
Pathway
sba03410
Base excision repair
sba03430
Mismatch repair
sba03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sba00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Sulba_0064
03430 Mismatch repair
Sulba_0064
03440 Homologous recombination
Sulba_0064
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sba03400
]
Sulba_0064
DNA repair and recombination proteins [BR:
sba03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Sulba_0064
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Sulba_0064
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Sulba_0064
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
AFL67393
UniProt:
I3XTW9
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All DBs
Position
58039..59622
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AA seq
527 aa
AA seq
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MGSLLTKEEIKRILQSRFKHDECTRLNEIPKPSSLKDIHKASKRIVRAIREHERIAIVGD
YDVDGVISSVILSQFFDDVGVDYTLIIPNRFTDGYGLNPEIVAKLDVQVIITVDNGISAV
EAARICKEQGIDLIITDHHNVPEVLPEAYAIVNPKQEDCSFPHCEICGAQVAWYLVAALK
EEMGIEYDLSSFLDLLCIAIMADMMELLGMNRVMVKKGILELNRSKRPAFEAIRQYYGKR
TFESDDISFLIAPLINSSGRMEDAMFSYAFIKASNVEEALKRLDYIVSLNEARKEEERLL
FEATLPYVNENENIIVVWGEEWHEGIVGIVASRLSKRFKKPAIVFSIKDEKAKGSARGVG
GVNILELIRAQEKFLIGYGGHKGAAGVSIEVHHLPHFKEKLVEAARILSQEELEADNDLL
GEISADQIDFELLEILEQQEPYGQKNPKPSFLLRNISVKVDRFIGKEGQHLKLILQEGTN
ALEALFFNYDVKARQGDKIDILFTLSRNDYRGLVTPQLMIKQIIKKH
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgggtagtttgctcacaaaagaggagataaaacggattcttcaaagtaggtttaaacac
gacgaatgtacccgtttaaatgagattccaaaaccctcctcgcttaaagacattcataaa
gcctccaaacgtattgttagggcaatacgtgagcatgagcgcattgctattgtgggagat
tatgatgtggatggcgttatctcttcggtcattttaagccagttttttgatgacgtaggg
gttgattacaccttaatcattcccaatcgttttaccgatggttatgggttaaatccagag
attgtagcaaaactagatgtgcaggttatcattacggtggataatggtatttctgccgtt
gaagcagcacgtatttgtaaagaacaaggcattgatcttattattacagaccatcataat
gttcctgaggttttacctgaggcgtatgccatcgtcaatcccaaacaagaagattgttcg
tttccccattgtgaaatttgcggggcacaagtggcatggtatttggttgcagccctcaag
gaagagatgggcattgagtatgatctctcaagttttttagacctattgtgtattgccatt
atggcggacatgatggaacttctaggtatgaatcgggtgatggttaaaaaagggatttta
gaactaaatcgttctaaacgtcctgcttttgaagccattcgacagtattacggtaagcgt
acctttgagagcgatgatatatcttttttaatagcccctttaattaacagttcaggacgc
atggaagatgctatgttctcgtatgcgtttattaaagcgagtaatgttgaggaagcgctc
aagcgacttgattatattgtttccctcaatgaagcacgaaaagaagaagaacgtctcttg
tttgaggcaacattaccctatgtcaatgagaatgaaaatattattgttgtttggggtgaa
gagtggcatgagggcattgtgggtattgtcgcctccagactttctaagcgctttaaaaaa
cctgccattgttttttccatcaaagatgagaaggctaagggaagtgcaagaggtgttggt
ggggtaaatattttggagctaatccgtgcacaagagaaatttttaattggctatggtgga
cacaaaggggctgcgggtgtttctattgaagtgcatcatttgccccattttaaagaaaaa
ttggttgaagcagcgcgtattttgagtcaagaagaattggaagcagataatgacctgctt
ggtgaaatcagtgcggatcaaatagactttgaacttttagagattttagaacaacaagaa
ccttacgggcaaaaaaatccaaaaccgagctttttactgcgtaatattagcgtcaaagtg
gaccgttttattggtaaagagggtcagcatttaaagcttattttacaagagggaaccaat
gcgcttgaagcgctcttttttaattacgatgtcaaagcaaggcaaggagataagattgat
attttatttacgctctcacgcaatgattatcggggtttggtgacgcctcagctcatgatt
aagcaaattattaagaagcactga
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