Sulfurospirillum barnesii: Sulba_0388
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Entry
Sulba_0388 CDS
T02139
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
sba
Sulfurospirillum barnesii
Pathway
sba03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sba00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Sulba_0388
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sba03021
]
Sulba_0388
03400 DNA repair and recombination proteins [BR:
sba03400
]
Sulba_0388
Enzymes [BR:
sba01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Sulba_0388
Transcription machinery [BR:
sba03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Sulba_0388
DNA repair and recombination proteins [BR:
sba03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Sulba_0388
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
AFL67707
UniProt:
I3XUT3
LinkDB
All DBs
Position
354184..358341
Genome browser
AA seq
1385 aa
AA seq
DB search
MLNSLKSGNRLRVDFSKVPKKIDVPNLLQLQQKSYEQFLNVENLHDESGVEKVFKAIFPI
HDPQNRITLEYVGSEIGKPRYTVRECMERGLTYSVSIKMNIRLILWDKDEKTGEKTGVKD
IKEQAIFIREIPLMTDRTSFVINGVERVVVNQLHRSPGVIFKEEESPTVTNKLIYNAQII
PDRGSWLYFEYDAKDTLFVRINKRRKVPITILFRALGYSKQDILKLFYPVLNILIRDNKF
LIEFSADNFLGRVDFDLKDENGNLLLAAGKRLARKKAEKFIEDGIKFVEYPIEILVNRFL
SSPIIDQESGEVLYDTLTQLDEGKLAKIIEQKCETIEIANDLASGVDDAIINSFIADTET
LKLLRQTENVEDENDLAAIRIYKVMRPGEPVTKEAAKLFVKDLFFNSERYDLTKVGRMKM
NHKLGLSVPEYVTIMTSEDIIKTVKYLIKVKNGQGHIDDRDHLGNRRIRAIGELLANELH
SGLIKMQKAIRDKFTALSGNVEELMPHDLINSKMITSAVSEFFSSGQLSQFMDQTNPLSE
ITHKRRLSALGEGGLVKERAGFEVRDVHPTHYGRICPVETPEGQNIGLINTLSMYAKVND
LGFVEAPYRKVENATITDEIIYITATQEEGLVIAPASTKINENNEIVEDLIEVRVDGETV
LIEKEKVDLIDLSSMMIAGVAASLIPFLEHDDANRALMGSNMQRQAVPLVKSDAPIVGTG
VEKIAARDSWEAIKAKRAGVVEKVDNKNVYILGEDENGAFIDHYALQKNLRTNQNTTFTQ
KVIVRKGDFIEKGGVIADGPSMDQGELAIGKNAMVAFMPWNGYNYEDAIVISERMIREDA
FTSVHIYEKEVEARELKDGVEEITKDIPNVKEEELAHLDDSGIVKVGTYVSPGMILVGKV
SPKGEVKPTPEERLLRAIFGEKASHVVNKSLYATPSLEGIVVDVKIFTKKGYDKDPRAVQ
AYEQEKEILDREHHDKLLMLDREEMLRINALLLKNPLQEDQEINKTAYKKGDFIKAEDLQ
NVNRFSINSIVKSFSNEVQDDYKDLKAYFQNEKKKLKEVHDEKLNIIEKDDILPSGVVKL
VKVYVATKRKLKVGDKMAGRHGNKGIVSNIVREVDMPYLANGEIVDIVLNPLGVPSRMNI
GQILEVHLGLVGKRLGNQIEEIFKEKQGDWIKALREKMISIADVAKLMDARNFIDKIDDE
QLLIYARDWSKGVKFASPIFEGVNIEEFDKLFEMAKIDTDGKTHLYDGMTGQKMHEKVNV
GYMYMLKLHHLVDEKVHARSTGPYSLVTQQPVGGKALFGGQRFGEMEVWALEAYGAAHTL
REMLTVKSDDVEGRILAYKALTRGENVPQTGIPETFYVLTNELKSLALDVEIYDEVEEDD
TTRTN
NT seq
4158 nt
NT seq
+upstream
nt +downstream
nt
atgttaaatagcttaaaatctggaaatcgccttagagttgatttttccaaagtccctaaa
aaaattgatgtacccaatctactccaacttcaacaaaagagttacgaacagtttttaaat
gttgaaaatctccatgatgagagtggtgtagaaaaggtttttaaagcaattttccctatt
catgacccacaaaatcgcattactttagagtatgttggatcagaaattggaaaacctaga
tacacagtccgtgaatgtatggagcgaggactgacatattctgtaagtataaaaatgaac
attcgtcttatcctttgggataaagatgaaaaaaccggtgaaaaaacgggtgtaaaagat
attaaagaacaagccatttttattcgtgaaattccgttaatgaccgatagaacatcgttt
gttattaatggtgtcgaaagagtcgttgttaatcaacttcatagaagccctggcgttatt
tttaaagaagaagagagccccactgtaaccaataaactgatttataacgcacaaattatt
cctgatcgtggttcatggctctatttcgagtatgatgcgaaagacacactatttgttaga
attaataaacgtagaaaagtgcccattacgattttatttagagcattaggttacagcaaa
caagatattttaaaacttttttacccagtgcttaatattctcattcgtgataataaattt
ttaattgaattttctgcggataatttcttgggacgtgttgattttgaccttaaagatgaa
aatggaaacctccttttagctgctggtaagcgtttagcacgtaaaaaagcagaaaaattt
attgaagatggaattaagtttgttgagtatcctatagagattcttgtcaatcgtttttta
tcttctcctattattgatcaagagagtggtgaagtactttacgatacattaacacaactt
gatgaaggtaaattggcaaaaattattgagcaaaaatgcgaaaccattgaaattgcaaat
gatcttgctagtggagtggatgatgcaattattaactcgtttattgcagacactgaaaca
cttaaacttttgagacaaactgaaaatgttgaagacgagaatgatttagcagcgattcgt
atttacaaagttatgagaccaggcgagcctgtaactaaagaagccgcaaaactgtttgtc
aaagatcttttctttaattctgaaaggtacgatttaacaaaagttggtcgtatgaaaatg
aatcacaaactaggccttagcgtgcctgagtatgtgacaattatgaccagcgaagatatt
attaaaacggttaaatatctgattaaagtcaaaaatggacagggtcatattgatgataga
gatcacttaggtaatagaagaattagagccattggtgaactcttagcaaatgagttgcat
tcaggtcttattaaaatgcaaaaagctattcgtgataaatttacagcgcttagcggcaat
gttgaagagttaatgcctcatgatttgattaattctaagatgattacatcagctgtttca
gagtttttctctagtggacagttatctcaatttatggatcaaaccaatccactgagcgaa
attacgcataaacgaagactttcagctcttggtgagggtggtttggtgaaagagcgtgca
ggctttgaagtccgtgacgttcatccaactcactacggaagaatttgtcctgttgagact
ccagagggtcaaaatattggtttgatcaatacgctttccatgtatgcaaaagtaaatgat
ttaggttttgtagaagcaccgtaccgtaaagttgagaatgcaaccattaccgatgaaatt
atttatatcacagcaacgcaagaagaaggcttggttattgctcctgccagtacgaaaatc
aatgagaacaacgagattgttgaagatttgattgaggttagggttgatggtgagacagtt
ctaattgaaaaagaaaaagtggacttaatcgacctttcatctatgatgattgctggtgtt
gcagcttcactgattccattcttggaacacgatgatgcgaaccgtgctcttatgggctca
aacatgcaacgtcaagcagtacctttggtaaaatcagacgctccaattgtaggaacgggt
gttgagaaaattgcggctcgcgattcatgggaagcgattaaagcaaaacgtgcaggtgtc
gttgaaaaggtcgataataaaaatgtttatattttaggggaagatgaaaatggtgcattt
attgaccattatgcactccaaaaaaaccttagaactaaccaaaatacaacctttactcaa
aaagttattgtacgaaaaggtgactttattgaaaaaggtggtgtgattgcagatggtcca
agcatggatcaaggtgaacttgcaattggtaagaatgccatggttgcttttatgccttgg
aatggttataactacgaagatgcgattgttatctctgagcgtatgattcgtgaagatgcc
tttaccagcgtgcatatttatgaaaaagaagttgaagcacgtgaacttaaagatggtgtg
gaagagattaccaaagacattccaaacgtaaaagaagaagagttagcgcatcttgatgat
agcggtattgtcaaagtgggtacttacgtttcacctgggatgattttagtaggtaaggta
tcgcctaaaggtgaagtgaagccaacccctgaagagaggctactacgtgctatttttggt
gaaaaagcaagtcatgttgttaataaatcattgtatgcaacaccttcattagagggtatt
gttgttgatgtgaaaatctttaccaaaaaaggatatgacaaagatccacgtgctgttcaa
gcctatgagcaagaaaaagagattttagatcgtgaacatcatgataagctcttgatgttg
gatagagaagagatgcttcgcattaatgcattgttacttaaaaatccattgcaagaagat
caagaaattaataaaactgcttataaaaaaggtgattttattaaggctgaagatcttcaa
aatgttaatcgtttctctattaattcaattgtcaaatcattttcgaatgaagttcaagat
gattataaagatcttaaagcgtatttccagaatgagaagaaaaaactcaaagaagtacac
gatgaaaaacttaatatcattgaaaaagatgatattttgccaagtggtgtggtaaagctt
gtcaaagtatatgtcgcaaccaaacgtaaactcaaagtgggcgataaaatggcaggacgc
catggaaataaaggtattgtttctaatatcgttcgagaagtggatatgccttaccttgct
aatggagagattgttgacattgttctcaatccactgggcgttccaagtcgtatgaatatc
ggacaaattcttgaggttcacttaggtcttgttggtaaacgtttgggtaaccaaattgaa
gagatatttaaagagaaacagggtgattggattaaagcattacgtgaaaaaatgattagt
attgcagatgttgcgaagcttatggatgcaagaaatttcattgataagattgatgacgaa
cagcttttaatctatgctagagattggagcaaaggtgttaaatttgcaagtccaattttt
gagggtgttaatattgaagaatttgacaagctttttgagatggcaaaaatagataccgat
ggtaaaacacatttatacgatggtatgacgggtcaaaaaatgcatgaaaaagtcaatgtg
ggttacatgtatatgttaaaactccaccacttagttgatgaaaaagtgcatgcacgaagt
actggaccatactctttggtcacacaacagccagtgggtggaaaagcactctttggtggt
caacgatttggagagatggaggtatgggcattagaagcgtatggcgctgcacatactcta
agagaaatgttaacagtcaaatcagacgacgttgaaggcaggatcctagcttataaagca
ctaacacgtggtgaaaatgtaccacaaacaggaattcctgaaacattctatgttttaacg
aatgagttgaagtctttggctttagatgttgagatttatgatgaggtggaagaagatgac
acgactagaaccaattga
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integrated database retrieval system
