Sulfurospirillum barnesii: Sulba_0504
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Entry
Sulba_0504 CDS
T02139
Name
(GenBank) DNA/RNA helicase, superfamily II
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
sba
Sulfurospirillum barnesii
Pathway
sba03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sba00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Sulba_0504
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sba03019
]
Sulba_0504
Enzymes [BR:
sba01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Sulba_0504
Messenger RNA biogenesis [BR:
sba03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Sulba_0504
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AFL67821
UniProt:
I3XV47
LinkDB
All DBs
Position
470297..471535
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AA seq
412 aa
AA seq
DB search
MPFSTFKLCSHIQEALLHVGFTHPTPIQEKVIPLVLEKKDILARAQTGSGKSASFVLPLL
ELWNADKQEGKAKIKVLVLTPTRELCVQVAEAFESFGAFLHVKPKVVSVIGGEKIGEQLY
DIQKGCDIVVATSGRLLDIMSKKQINLSHVEFFVLDEADKMLDLGFEQELNAILEVLPKQ
RQNLLFSATYPEKMQTIAAKITKRAVDVSIEAEAPTVERIMQRAIEVNKENRAPLLRHLL
RENQWELVLVFMANKRAADNIAVKFRKHGFLAESFHGDLLQEDRAWTLKSFKERKIRVLF
ATDIASRGLDIEAVSCVINFDLPRATEDYIHRIGRTGRAGKEGLAISFIDHEDKAHFALI
EKRCGMCVVKEQIKGFELVGEAPKKEKGGAPIKGKRKSKKDKLREQKEGASA
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgccattttccacgttcaaactctgctcacacattcaagaagcgcttttacatgtagga
tttactcaccccacacccattcaagaaaaagtcattccacttgtgttagaaaaaaaagac
attctggcacgggcgcaaacgggaagtggaaaaagtgcttcgtttgttctgcctttattg
gagctatggaatgctgataaacaagagggcaaagcgaagataaaagtgctggttttaacg
ccaacccgtgagctttgtgtgcaagtggctgaggcgtttgaaagctttggagcgttttta
catgtaaagccaaaagtggtgagtgtgattggtggggagaagattggcgagcaactctac
gatattcaaaaagggtgcgacattgtggtggcaacctcaggacgactcttggatattatg
agcaaaaagcagattaatctctctcatgtggagttttttgtgcttgatgaagcggataaa
atgcttgatttgggctttgagcaagagctaaacgccatccttgaggtcttaccaaaacaa
cgccaaaaccttcttttctcagccacctatcctgaaaaaatgcagaccattgccgctaag
ataacaaaacgtgcggtggacgtgagcatcgaagcggaagcaccaacggttgagcgcatc
atgcaacgggctattgaagtcaataaagaaaaccgtgcgccactattgcgccacttgttg
cgtgaaaatcaatgggaattggttttggtttttatggcaaacaagagggctgcggataac
attgcggtgaagtttcgcaagcatggttttttggccgaatcctttcatggtgatttgctt
caagaagaccgtgcttggacgctcaagtcctttaaagagcgcaaaattcgtgttttattt
gccacagatattgcctcacgtgggcttgatattgaagcggtgagctgtgtgattaatttt
gatttgccgcgtgcaacggaagattacatccaccgcatcggacgaacgggacgtgcaggt
aaagagggtttggcgatttcgtttattgaccatgaagacaaagcgcactttgcgttaatt
gaaaagcgttgtgggatgtgcgttgtaaaagagcaaataaaagggtttgaactcgtaggc
gaagcacccaaaaaagagaagggtggtgcgccgattaaagggaagcgcaaaagtaaaaaa
gataaattaagagaacaaaaagagggtgcaagcgcctaa
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