KEGG   Sulfurospirillum barnesii: Sulba_0957
Entry
Sulba_0957        CDS       T02139                                 
Name
(GenBank) CRISPR-associated helicase Cas3/CRISPR-associated endonuclease Cas3-HD
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
sba  Sulfurospirillum barnesii
Brite
KEGG Orthology (KO) [BR:sba00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:sba02048]
    Sulba_0957
Enzymes [BR:sba01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Sulba_0957
Prokaryotic defense system [BR:sba02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    Sulba_0957
SSDB
Motif
Pfam: DEAD Cas3-like_C_2 ResIII Helicase_C Cas3_HD NPHP3_N AAA_22 PhoH Bdbt-like_TPR DUF6678
Other DBs
NCBI-ProteinID: AFL68258
UniProt: I3XWD4
LinkDB
Position
929825..932410
AA seq 861 aa
MPLLKFSDFDIKFNIDDKYKAHLSQNKQYKESLKEHIDLVYDYFLKLIEQNDLEQRLNSL
FKKSANLFEEIEVKEEFANFTKYLFAKAIYWHDMGKMNPNFQKEKMLNEIDEKSVISDSH
HSPLGAYLFINHSLDELYAKKWHEDNEEIFEAIIYLFGFLISKHHGVIYQYEDLDLQNEF
VDFLDKFHLETEHTKKLRDEDRVFSSIFDSIENNEEVLFLLSKSLFSLLIISDYYATAQF
MNYGNCKELKYKNFGLVDDDFRKTIYKRFYENQFDKELINKTTSDFKDFDELQEKSNSNL
NHLRNKLFIEVRTNLQNELKKNKSQNLFYIEAPTGAGKTNLSLMSVVEILKLDTSITKVF
YIFPFTTLITQTYTSIKKILALDNAQIVQLHSKAKYNQKQEEKEDGIYGEDKKNFLDNQF
MNYPMTLLSHVKFFDILTGISKDDNYIFHRLSNSIVIIDEIQTYSPDFWARIVYLLDMYA
KNFNIKFIVMSATLPKIGKIIDSQFTFLVSNKQRYFQNPNFAKRVTIDTNVKNINKPEEI
YELLIKGSENYQTLETNDSKKVKTIIEFITKKGADEFYKHAKKYSEIFDEIFILSGTILE
PRRKEIIDFIKNTHDKNILLVTTQVVEAGVDIDMDIGFKEKSLVDSDEQLAGRINRNSSK
EGNKLFLFSIGKGNDKFVYKKDKRNGLSGKYQEDGKEQNVLNTKDFDKFYSQILDKIIEN
NTKNFMENLKSYIDDLKNLQFKKTHIELIDMQSVSVFVPINDEAVAVWEAYEKTIQNKEQ
DLIDKKIDIKKLSAEISKYTFSLADYHGSGIKYLKDYGDEKYGYLYLKDWRNQKDDGTQL
YTYEDGLDTSVLKGDFVPMIL
NT seq 2586 nt   +upstreamnt  +downstreamnt
atgcctcttttaaaatttagtgattttgatataaagttcaatattgatgacaaatataaa
gctcatttatcacaaaataagcaatataaagagtcgttaaaagagcatattgatctcgtg
tatgattacttcttgaaacttatagagcaaaatgacttggaacagcgtttaaattctctt
tttaaaaaaagtgccaatctatttgaagagatagaagtaaaagaagaatttgcaaatttc
acaaaatatctttttgcaaaagcaatttattggcatgatatgggcaaaatgaaccccaat
tttcaaaaagagaaaatgctcaatgaaatagatgagaaatctgtaatttcagatagtcat
cattcacctcttggtgcatatttatttattaatcactcattagatgaactgtatgctaaa
aaatggcatgaagataacgaagaaatttttgaagctattatctatttgtttggattttta
atctcaaaacatcatggagtaatttatcaatatgaagatttggatttacaaaatgagttt
gttgattttttagataaatttcatcttgaaacagaacatacaaaaaagttaagagatgag
gacagggtattttcttcaatttttgattctattgaaaataatgaagaggtattgtttcta
ctttctaaatcccttttctcacttcttatcatttcagattactatgctacagcacaattt
atgaattatggaaattgtaaagaactaaaatataaaaattttggcttggtagatgatgat
tttaggaaaacaatttacaaaagattttacgaaaatcaatttgataaagaactcattaat
aaaactactagtgattttaaagactttgacgagttgcaagaaaagtcaaatagtaactta
aatcacttacgaaacaagctttttatagaagttagaacaaacttacaaaatgagcttaaa
aagaacaaatcacaaaaccttttttatatcgaagctcccacaggtgcaggtaaaacaaac
ctatcactcatgagtgtcgttgagattttaaagcttgacacttcaatcactaaagtattt
tatatttttccatttacaacgctgatcactcaaacatatacttctatcaaaaaaatacta
gctcttgataatgctcaaatcgtgcaacttcattcaaaagcaaaatataatcaaaagcaa
gaagaaaaagaagatggcatttatggagaggataaaaagaattttttagataatcaattt
atgaattatcctatgacacttctaagccatgttaagttttttgatatattgactggaatt
agtaaagatgacaattatattttccatagattatcgaactcaatcgtcatcatagatgag
attcaaacatacagcccagatttttgggcacgaattgtttatttacttgatatgtatgct
aaaaatttcaatattaaatttatagtaatgagtgcaactttgcctaagattggcaagatt
atagatagtcaatttacatttttagtttccaataaacaacgatattttcaaaatccgaat
tttgcaaaaagagtgacaatagacacaaatgtgaaaaatataaataaacctgaagagatt
tacgagttattgataaaagggagtgaaaactatcaaaccttagaaaccaatgattcaaaa
aaagtaaaaaccattatagaatttatcacaaaaaaaggggcagatgaattttataaacac
gccaaaaaatacagtgaaatttttgatgagattttcatacttagcggtacgattttggaa
ccaagacgaaaagagataatcgattttataaaaaatacacacgacaaaaatattctactt
gtgacaactcaagtggttgaagcaggcgtggatatagatatggacataggatttaaagaa
aaatctctcgtcgatagtgatgaacaactagcaggaagaatcaaccgaaatagttcaaaa
gagggcaataaactatttttatttagcattggcaaaggaaatgataaatttgtttacaaa
aaagataagagaaacggtctttctggaaaatatcaagaagacggtaaagaacaaaatgtt
ttaaacactaaagattttgataaattttatagtcaaattttagacaagattattgagaac
aatacgaaaaattttatggaaaatctcaaaagctatattgatgacttgaaaaatttacaa
tttaaaaaaactcatattgaacttatagatatgcaatcggtttctgtgtttgttcccatt
aatgatgaggctgttgcagtatgggaggcatatgaaaaaactatacaaaataaagagcaa
gatttgattgataaaaaaattgatattaaaaagttaagtgcagaaatatcaaaatatact
ttttctttggctgattatcacggtagtggtattaaatatttgaaagattatggagatgaa
aagtatggatatttatatttgaaagattggcgaaatcagaaagatgatggtacacaattg
tacacctatgaagatggtttggacacaagtgtattgaaaggtgactttgttccaatgatt
ttataa

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