Sulfurospirillum barnesii: Sulba_1082
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Entry
Sulba_1082 CDS
T02139
Name
(GenBank) tRNA pseudouridine synthase, TruD family
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
sba
Sulfurospirillum barnesii
Brite
KEGG Orthology (KO) [BR:
sba00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sba03016
]
Sulba_1082
Enzymes [BR:
sba01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
Sulba_1082
Transfer RNA biogenesis [BR:
sba03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Sulba_1082
Prokaryotic type
Sulba_1082
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AFL68379
UniProt:
I3XWQ5
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All DBs
Position
1046703..1047794
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AA seq
363 aa
AA seq
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MIRQFFLTHSPINATFTKNSSDFVVSEIPLYPFSGEGEHLVLHVRKKDMTTWDMLQYLSE
VTGCKVRDFGYAGLKDKEGMTTQYVSLHKSFEPKLANFSHEKIKILDTTYHNNKIRTGHL
KGNRFFVRLKKVSHIDAKKLQDGLKKIAKEGFPNFFGYQRFGIDGDNYLKGKAILEGSRK
ERNPKMKEFFINAYQSYLFNNWLSKRIEISRLIEEFNVSDGVRSTNLPKEMVENLKKQPQ
FFKMMHGDVLHHYPAGKAFVCENVDEELPRFLERGISIAGWLLGGKNIRAEHEAGVIEQE
MFKECEPFLDKLNGSRRFAWSFAEEVEGVYKEEEAWFEMHFSLPKGSYATVIIEELTKQF
KDL
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgatacgacaattctttctcacccattcacccataaatgctacattcaccaaaaacagc
agtgactttgtggtgagtgaaattcccctttatccctttagtggtgagggcgagcatttg
gttttacatgtaagaaaaaaagatatgactacatgggatatgttgcaatacttaagtgaa
gtcacagggtgtaaagtacgtgattttgggtatgctgggcttaaagacaaagagggtatg
accacacagtatgtctctcttcataagagttttgagccaaaacttgccaatttttcgcat
gaaaaaattaagattttagatacgacgtaccataacaataaaatacgcacaggacatctt
aaaggcaaccgcttttttgtacgccttaaaaaagtcagccacattgatgcgaaaaaactt
caagatgggcttaaaaaaattgccaaagagggctttccaaacttttttggctaccagcgt
tttggcattgatggcgataattaccttaaaggcaaagctattttagagggaagcagaaaa
gagcgaaaccctaagatgaaagagttttttattaatgcgtatcaaagctatttgtttaac
aattggctctctaagcgcattgaaatcagtcgcttgattgaagagtttaatgtgagtgat
ggcgtacgctctaccaatttacctaaagaaatggtcgaaaatcttaaaaaacaaccccaa
ttctttaaaatgatgcatggtgatgtcttgcaccactacccagcaggaaaagcctttgtg
tgtgaaaatgtggacgaagaactcccccgctttttagagcgaggcattagcattgcaggc
tggttactcggtggtaaaaacattcgtgcagagcatgaagcgggtgtgattgagcaagag
atgtttaaagagtgtgagccttttttagacaaactcaatggaagcagacgttttgcatgg
agttttgcagaagaggttgagggcgtttataaagaggaagaggcatggtttgagatgcac
ttttcacttcccaaaggctcttatgcgaccgtaattatagaagaattgacaaagcagttt
aaagatttataa
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