Sulfurospirillum barnesii: Sulba_1583
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Entry
Sulba_1583 CDS
T02139
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
sba
Sulfurospirillum barnesii
Pathway
sba03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sba00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Sulba_1583
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sba03019
]
Sulba_1583
03400 DNA repair and recombination proteins [BR:
sba03400
]
Sulba_1583
Enzymes [BR:
sba01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Sulba_1583
Messenger RNA biogenesis [BR:
sba03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Sulba_1583
DNA repair and recombination proteins [BR:
sba03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Sulba_1583
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
Helicase_Sgs1
AAA_30
CDH-cyt
Motif
Other DBs
NCBI-ProteinID:
AFL68871
UniProt:
I3XY47
LinkDB
All DBs
Position
complement(1556359..1558149)
Genome browser
AA seq
596 aa
AA seq
DB search
MDKTYDILQRVFGHHSFRANQEEAVNAILAHKDLMMILPTGAGKSLCYQLPSLVMEGMSV
VISPLLALMHDQITALSAFGIKAAMISSMQSPSQIQESMQACRNGELKLLYVAPERLKGE
SFLNFLQSLCINFFVIDEAHCVSEWGHEFREDYRQLFRLKHYFPRTPIAAFTATATKIVE
HDILHQLGLSHPLIIRAKVERDNLNIKADYRNANGREQLLSFLSAFQNESGIVYTLTRKE
TESLALFLEGYKVRARSYHAGLSTEEKNETYRAFLNDEIDVVVATIAFGMGIDKSNIRFV
VHMSLPKTIENYYQEIGRAGRDGLSASTLLLFSASDIVEHKRRISEQPASEYQKVAYEKL
EAMAKFATSQLCRHQQIATYFDDTILTCNTRCDNCVEGEKQSVDISNEALKLLSCVYRTG
QRFGLQYVIDVLMGANNEKIAQNAHQNLSVYGIGKERSKAQWLSIGDRLLELEALKVGEY
RVVSLSEYGAQIIKERLHVSMHAKRLEERKKVSKKATKVVTGAFELSIFEKLRALRLEIA
QENGIPPYVVFSDKTLKEMAEKLPHDKEAMLEVSGVGEVKFERYGEAFLALCMRLR
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
gtggataaaacatacgatattcttcaacgtgtctttgggcaccacagctttagagccaat
caagaagaggctgtcaatgcgattttagcgcataaagaccttatgatgattttacccaca
ggagcagggaagtctttgtgttatcagcttccctctcttgtaatggagggcatgagcgtg
gtgatttcaccgcttttagcgctcatgcacgaccaaatcaccgcactctctgcctttggc
attaaagcggcgatgatttcatccatgcaatctccctctcagatacaagagagtatgcaa
gcgtgtcgcaacggtgagcttaaacttttatacgttgcacctgaacgcttaaagggtgag
tcgtttttaaacttcttacagagcctttgcatcaacttttttgtcattgacgaggcgcat
tgtgtgagcgagtgggggcatgaatttagagaagattaccgtcaactctttcgtcttaaa
cactactttcctcgtactcccattgctgcatttacggcgacagcaacgaaaattgtcgaa
cacgatattttgcatcagctcggattgtcacaccccttaatcattcgagccaaagtcgag
cgggacaatttaaacatcaaagcggactatcgcaatgccaacgggcgtgagcaacttttg
agttttttaagtgcgtttcaaaatgagagtggtattgtgtatacattgacacgcaaagag
acggagagtttggcgctgtttttagaagggtacaaagtgcgtgcacgctcgtatcatgca
gggctttctactgaggagaaaaacgaaacgtaccgtgcttttttaaacgatgaaattgac
gtggtggttgcaaccatcgcctttggtatggggattgataagagcaatattcgttttgtg
gtgcacatgtcactgccaaaaaccattgaaaattactaccaagaaatagggcgtgcaggg
cgagacggtctgagtgcttcaaccttgcttcttttttcagcctccgacatagtggagcac
aaacgacgcatcagcgaacagcctgcctcggagtaccaaaaggtagcctatgaaaagcta
gaagctatggcaaaatttgcaacatctcagctgtgccgtcatcaacaaatagcgacctat
tttgacgataccattcttacatgtaacacccgttgcgataactgtgtggagggtgaaaag
cagagtgttgacatctcaaacgaggcattaaagctactctcttgtgtgtaccgcacaggg
caacgctttggactgcaatacgtcattgatgttttaatgggtgcaaataatgaaaaaata
gcgcaaaatgcgcatcaaaacctctccgtttatggcattgggaaagagcgaagtaaggcg
cagtggcttagcattggcgatagacttttggagcttgaagcgttaaaagttggcgaatac
cgtgtggtgagtcttagtgaatatggagctcaaatcatcaaagagcgtttacatgtaagc
atgcatgcgaagcgtttggaagagcgtaaaaaagtctctaaaaaagcgacgaaagtggtt
acaggagcgtttgagctttccatttttgagaaattacgtgccttgcgtttggaaattgct
caagaaaatggcattccgccgtatgtggtttttagcgataaaaccctcaaagagatggct
gaaaaacttcctcatgacaaagaggcaatgttggaagtcagtggtgtgggtgaggtgaag
tttgagcgctacggtgaagcatttttagccttgtgtatgaggcttcgttaa
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