Sulfurospirillum barnesii: Sulba_1669
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Entry
Sulba_1669 CDS
T02139
Name
(GenBank) Excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
sba
Sulfurospirillum barnesii
Pathway
sba03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sba00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Sulba_1669
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sba03400
]
Sulba_1669
DNA repair and recombination proteins [BR:
sba03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Sulba_1669
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Sulba_1669
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
DUF87
SWI2_SNF2
T2SSE
Kinesin
Microtub_bd
UB2H
AAA_14
DUF1128
TrwB_AAD_bind
AAA_22
AAA_7
nSTAND_NTPase5
TerB
Motif
Other DBs
NCBI-ProteinID:
AFL68957
UniProt:
I3XYD3
LinkDB
All DBs
Position
1641678..1643654
Genome browser
AA seq
658 aa
AA seq
DB search
MSEFFLESPYQPSGDQPRAIETLSASIKKGNRYQTLIGVTGSGKTYTMAQIIQKLKMPTL
IMTHNKTLAAQLYSEFKGFFPKNHVEYFISYYDYYQPEAYIPRSDLFIEKDSSINEELER
LRLSATASLLSYDDVICVASVSANYGLGNPHEYKQMVQIIEKGESINQKKLLLRLVDMGY
KRNDTFFDRGCFRVNGDVVDIFPAYNEEEAIRVEFFGDEVESIHYFDVFLNKKLQSLPKV
VIYAANQFIVGHERLQKAMKLIEQELDERLAYLKKEDKLVEHQRLKQRVEFDLEMMGATG
MCKGIENYARYLTGIEPGGTPYSLFDYFEAMNKEYLVIVDESHVSLPQFRGMFAGDRSRK
EVLVEYGFRLPSALDNRPLMFDEFINKAPRYLFVSATPKELELTLSGENVAEQIIRPTGL
LDPEVEILSSKNQVETLFDRIKEVTCKDEKVLVTVLTKKMAEELTRYYADLGIKIKYMHS
DIDAIERNQIIRSLRVGEFDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSETSLIQT
MGRAARNLNGRVIMFAEKITDSMQKAIETTLRRRAIQEEHNQKHGITPTSTTRKMDENLK
LEEHADIYNTFDKKDKIPPSEKKKIIAELTKAMHEAAKILEFEKAAKLRDQIEKLKKA
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaatttttcctagaaagtccctatcaaccctcaggcgaccagcctcgtgccatt
gaaacactaagtgcttccatcaaaaaaggaaaccgctaccaaaccctcataggagtgact
ggcagtggtaagacctacaccatggcgcaaattattcaaaaactaaaaatgcccacatta
attatgacgcacaacaaaacccttgccgcacagctttacagcgaatttaagggctttttc
cctaaaaatcatgtggagtattttatcagctattatgattattatcagcctgaagcgtac
attcctaggagtgatttgtttatcgaaaaagacagttctattaacgaagagctggagcgt
ttgcgtttgagtgccaccgcttcactcttaagttacgatgatgttatttgcgtagcgtcg
gtttcggcaaactatggcttgggaaatccccacgaatacaaacaaatggtgcaaatcatc
gaaaaaggtgagagcattaaccagaaaaagcttcttttacgtttggtggatatgggctac
aaacgcaatgacaccttttttgatagaggatgctttcgtgtgaatggggacgtggtggat
attttccctgcgtacaacgaagaagaagcgattcgggttgagttttttggcgatgaagtg
gagagtattcactattttgacgtttttctcaacaaaaaactccaaagcctacctaaagta
gttatttatgccgccaatcagtttattgtagggcatgagcggcttcaaaaggctatgaaa
ttgattgagcaggagttggatgagcgcttagcctatcttaaaaaagaggacaaactggtc
gaacaccaacgcctcaaacaaagggttgagtttgatttagagatgatgggggcaacggga
atgtgcaaaggcatcgaaaactacgctcgctaccttacagggattgaaccagggggcacg
ccttattcactgtttgattactttgaagcgatgaataaagagtacctcgttatcgtcgat
gaatcacacgtcagccttcctcaatttcgtggcatgttcgcaggagatagaagtcgcaaa
gaagtactggtagagtatggctttaggcttcctagtgccttagataaccgtcctttgatg
tttgatgagtttattaacaaagcgcctcgttatttatttgtcagtgcaacacctaaagag
ttggaactaacgcttagtggtgaaaatgtcgcagagcagattattcgtcctacaggattg
cttgaccctgaagtagaaattttgagcagtaaaaatcaagtcgaaacgctgtttgatcgc
atcaaagaggttacatgtaaagatgaaaaagtgcttgtcaccgtgcttaccaaaaaaatg
gcagaagagctcacacgctattacgccgatttaggcattaaaataaaatacatgcactcg
gatattgacgccattgagcgcaatcagattattcgctctttgcgtgtgggagaatttgac
gtgttggtgggtattaacctccttcgtgaagggcttgatttgcctgaggtttctttagtg
gctattttagatgcggataaagagggatttttacgctcagagacaagcctcattcaaacc
atggggcgagccgcacgtaatttaaacggcagggttattatgtttgcagaaaagattacc
gattccatgcaaaaggcgattgagacaacgctaagaagacgtgctattcaagaagaacac
aatcaaaaacatggtatcacccccactagcaccacacgtaagatggatgaaaatctcaaa
cttgaagagcatgctgatatttacaatacctttgataagaaagataaaatcccgcctagt
gaaaagaagaaaattatcgctgaacttaccaaagcgatgcatgaagccgcaaagattttg
gagtttgaaaaagcagccaaactgcgggatcaaattgaaaaactcaaaaaggcataa
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integrated database retrieval system
