Sulfurospirillum barnesii: Sulba_1672
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Entry
Sulba_1672 CDS
T02139
Name
(GenBank) exonuclease, DNA polymerase III, epsilon subunit family
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
sba
Sulfurospirillum barnesii
Pathway
sba03030
DNA replication
sba03430
Mismatch repair
sba03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sba00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Sulba_1672
03430 Mismatch repair
Sulba_1672
03440 Homologous recombination
Sulba_1672
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sba03032
]
Sulba_1672
03400 DNA repair and recombination proteins [BR:
sba03400
]
Sulba_1672
Enzymes [BR:
sba01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Sulba_1672
DNA replication proteins [BR:
sba03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Sulba_1672
DNA repair and recombination proteins [BR:
sba03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Sulba_1672
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DEDDh_C
RNase_H_2
BTB_BTBDG
Motif
Other DBs
NCBI-ProteinID:
AFL68960
UniProt:
I3XYD6
LinkDB
All DBs
Position
complement(1646373..1647173)
Genome browser
AA seq
266 aa
AA seq
DB search
MRPLDNFITKLTQKPIFYKEFFAKMHTFKELEPVDVEDLEMLKLLGLPICKYNNYALTLE
TLTTPICEGKFCIVDIEANGSKPTVDAIIEIGAVMVEKGKIIGEFSSLAKTDSLPESITQ
LTGITLDELAFAPSLNSVLEGFRLFIRDAVFVAHNVNFDYYFISYALEQAGFGPLLNRRL
DTIDLARKCIEAPKYGLSALAEHLGISFENHHRALFDAKATTEVFLHTLHHLPEEVLTVE
QLIAFSRPQQQRKKKKEKQTKPDTSL
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
gtgagacctctggataattttattactaaactaacgcaaaaacccattttttataaagag
ttttttgcaaaaatgcatacttttaaagagttggagcctgtggatgttgaagatttggag
atgcttaagcttttagggcttcccatttgtaagtacaacaattatgcactgaccttagaa
acgcttacaacacctatttgcgagggaaagttttgcattgttgatattgaagccaatggt
tcaaaaccaaccgtggatgcgattattgagattggtgcggttatggttgaaaaagggaaa
attattggggagttttcttccttagctaaaacggatagtttacctgaaagtattactcaa
ctgacaggcattacactcgacgaacttgccttcgcaccttcgctaaactcagtgctagaa
gggtttaggctttttattagagatgcggtttttgtggcacataacgtgaattttgactat
tatttcatctcttatgcgcttgaacaagcaggctttggtcctttattgaaccgaaggctt
gatacgattgatttggcacgaaaatgcatagaagctccaaaatacgggctaagtgcgttg
gcagagcatttgggaattagctttgaaaatcatcaccgtgccttgtttgacgctaaagcc
accacggaagtttttttacacacactccatcatttaccagaagaggtgctcacggtggag
caactcattgcttttagtagaccccaacaacaacgaaaaaagaaaaaagaaaaacaaact
aagcctgatacatcgctttaa
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