Sulfurospirillum barnesii: Sulba_1701
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Entry
Sulba_1701 CDS
T02139
Name
(GenBank) DNA/RNA helicase, superfamily I
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sba
Sulfurospirillum barnesii
Pathway
sba03420
Nucleotide excision repair
sba03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sba00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Sulba_1701
03430 Mismatch repair
Sulba_1701
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sba03400
]
Sulba_1701
Enzymes [BR:
sba01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Sulba_1701
DNA repair and recombination proteins [BR:
sba03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Sulba_1701
MMR (mismatch excision repair)
Other MMR factors
Sulba_1701
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
CarD_TRCF_RID
AAA_11
PhoH
DUF3718
Motif
Other DBs
NCBI-ProteinID:
AFL68989
UniProt:
I3XYG5
LinkDB
All DBs
Position
complement(1674221..1676266)
Genome browser
AA seq
681 aa
AA seq
DB search
MQDLATLNESQQDAIKCVDGPVLILAGAGSGKTKTITTRLSYLLSLGIPAANTLTLTFTN
KAASEMRERAMAMINSHSYPPLLCTFHKFGLLFLKFHMDKLGRKNSFVVIDTDDKKRILK
NLNTSSELPTGMIASEISRYKTSLLDPKVAWEKAEQQNYQIIAKLYEQYEDYLLSNNLVD
FDDLLVLPYKILESDETLCEETSRRYQYIMVDEYQDTNELQYKLLRKLCHTHSNLCVVGD
DDQSIYGWRGANIKNILEFHESFENVKIVKLEKNYRSTTQILKAANDLIDHNRGRIGKVL
ESTKGEGKAIEVLESHDENQEALSIARKIRKLIESGVNPRDIAVLYRINALSRSLEEGLN
KEKIPYNMVGGVKFYERAEVKDVISYLRVIANPHDDFSIKRIINRPKRGLGKVTMERIFK
AAYENTQSIYEYITCNEEGIEKEASKKAALALKEFVHNIARMQTIQAHSTYDMIDAIEEA
FAIKEYYNNQPDSLERLSNIDEFYGLFRDYVKQNPQMGVDDFLNELALQSDQDQIDSENI
SIMSIHASKGLEFEYLFVIGLEEGFFPLVGDGSDIEEERRLGYVAITRAKKELTLSFSGS
RFYKGRRTELSKSRFLKEAGVCEGSLILERTTSFKKGDLVKHKIFGIGRVTEVSKVGREF
KLQINFSGTKRDILASFVEKI
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgcaagatttagcgacgttaaatgaatcacaacaagatgcaatcaaatgtgtggatggc
cctgtgcttattttagcaggcgcaggcagtggtaaaactaaaaccattaccacaaggctt
tcgtatttgctttctttaggcattccagcagccaatacgcttacgctaacctttacgaat
aaggctgctagcgagatgcgagaacgtgctatggcaatgataaattcacactcgtatccc
ccactgttgtgtacctttcataaatttggtcttttgtttttaaaatttcacatggataaa
ttagggcgtaagaacagttttgtggtcattgacaccgatgataaaaaacgtattttaaaa
aatttaaatacatccagtgaacttccaacaggaatgattgctagtgaaatttcacggtat
aaaacttctttgctggaccccaaagtcgcatgggaaaaggcagaacagcaaaattatcaa
attattgcaaaattatatgaacagtatgaagattatctgctttccaataatttagttgat
tttgacgacctcttggtgcttccttataaaattttagagagcgatgagactttatgtgaa
gagaccagtagacgctatcaatacattatggtcgatgagtatcaagatacaaatgaactg
cagtataaactgcttcgtaagctttgccatacacacagcaatttgtgcgtggtgggcgat
gatgatcaaagtatttatggctggcgtggagcaaatattaaaaatattttggaatttcat
gaatcctttgaaaatgtaaaaattgttaaacttgaaaaaaattatcgctcgaccacgcag
attcttaaagcggcaaatgatttaatcgaccacaatcgtggacgcatcggtaaagtctta
gagagtacaaaaggggagggcaaagccattgaagtcctcgaatcacatgatgaaaatcaa
gaagcgttaagcattgctcgaaaaattcgaaagcttattgaaagcggtgtaaatcctagg
gatattgcggtgttgtaccgcattaatgcgctgagtcgttctttagaagagggacttaac
aaagagaaaattccttacaacatggtagggggtgtaaagttttatgagcgtgctgaggtc
aaagatgtcatcagttatctccgtgtcattgccaatcctcatgatgatttttccatcaag
cgcattatcaatcgtcctaaacggggtcttggaaaagtgacgatggaacgcatttttaaa
gcagcgtacgagaacacgcaatccatttatgagtacattacatgtaatgaggaagggatt
gaaaaagaggcgagtaaaaaagcagcgctagcactcaaagagtttgttcacaatattgct
cgtatgcaaaccattcaagcccattccacctacgatatgattgatgcaattgaagaggcg
tttgccattaaagagtattataacaatcaaccagactcgctagagcgtctctccaacatt
gatgaattttatggactttttcgagattatgtgaaacaaaatccgcagatgggcgtggat
gattttttaaatgaattggcattgcagagcgatcaagatcagatcgatagtgagaatatc
tccattatgagtattcatgcgagtaaaggtttagagtttgaatacctgtttgtgattggt
ctggaagagggatttttcccattggttggcgatggaagcgatatagaagaagagcgtcgt
ttggggtatgtcgccattactagagcaaaaaaagagctgacccttagtttttcaggaagt
cgtttttacaaaggaagacgaacggaactttcaaaaagccgttttttaaaagaagcaggg
gtgtgtgagggaagtttgattttagagagaaccacatcgtttaaaaaaggggatttggtc
aaacacaaaatctttggaattggtcgtgtcactgaagtgagtaaggtgggtagggagttt
aaattacaaattaattttagtggaaccaaacgtgatattttggcttcctttgtcgagaaa
atttag
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