Sulfurospirillum barnesii: Sulba_2264
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Entry
Sulba_2264 CDS
T02139
Name
(GenBank) DNA/RNA helicase, superfamily II
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
sba
Sulfurospirillum barnesii
Pathway
sba03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sba00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Sulba_2264
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sba03019
]
Sulba_2264
03009 Ribosome biogenesis [BR:
sba03009
]
Sulba_2264
Enzymes [BR:
sba01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Sulba_2264
Messenger RNA biogenesis [BR:
sba03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Sulba_2264
Ribosome biogenesis [BR:
sba03009
]
Prokaryotic type
rRNA helicases
Sulba_2264
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
Helicase_RecD
ARM_LRRK2
CCDC24
Motif
Other DBs
NCBI-ProteinID:
AFL69539
UniProt:
I3Y015
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All DBs
Position
2221360..2223132
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AA seq
590 aa
AA seq
DB search
MENNTSTPTFESFGLHQDILKAVTEAGFTEPSPVQAESIPLVLAGHDIVAQAQTGTGKTA
AFGLPTMSMIDAHQNKVQLLVITPTRELATQVSDELYSLGRFCGIKTVTIYGGSSYSRQI
GLIEKGASVIVATPGRMLDLLKNGRLPGFSPKMVVLDEADEMLDMGFLEDIEEIFTYLPK
ERQTLLFSATMPDPIKRLASKILNDPKFVSVTPKDHTTNDDIEQLYYVINEYERDDAMIR
LLDALEPEKSIVFCRTKKEVDRLSTQLMAVGYAAKGLHGDMEQNQRESVIKAFRSSQIEI
LVATDVAARGLNVADISHVFNYHMPFDPESYVHRIGRTGRAGKKGTAITLVTPIEFHSMQ
RIGKKVGSKIEHRIVPSLRDVKENKLVKIADDIKNADIHESAVKLLALLEEEMDMSQIAL
KLLSNLLKENSPVGPDKIGLDKKTLENVVKNIEERENSRGGRGGYRGNSGGRSSGGYRGN
SSGSRDGGSYRGTSSGSRDGGGYKGSNPRDAGSRDSRPPRSDSAPRGESRNPFAKEGSST
GSRDGGGYKGTRDSGDSRPPRAPRADRPSAPRSDAGRAPKAAPRNAYKKD
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacaacacatcaacacccacatttgaatcttttggcttacaccaagatattcta
aaagccgttacagaagcgggctttacagaaccaagccccgtacaagcagagtcaattcct
ttagtattagcaggacatgacatcgttgcgcaagcacaaacaggtacaggtaaaacagcc
gcatttggtcttccaaccatgagcatgatagatgcgcaccaaaacaaagttcaactttta
gtgattacgccaacccgtgaactagccacacaagtgagcgatgagctttactcgttggga
cgtttttgcggcattaaaaccgttaccatttatggaggtagctcttacagccgtcaaatt
ggtttgattgaaaaaggggcaagcgttatcgttgccacaccaggtcgtatgcttgatctt
cttaaaaatggcagacttcctggtttttcaccaaaaatggttgtcctagacgaagccgat
gagatgcttgatatgggctttttagaagacatcgaagagatctttacctaccttccaaaa
gagcgtcaaaccctccttttctcagcaacaatgccagatcccatcaaacgtcttgcaagc
aaaatcttaaatgatccaaaatttgtcagtgtgacaccaaaagatcacacgacaaatgat
gatattgaacaactttactacgtgatcaacgaatacgagagagacgatgcgatgattcgt
cttttagatgcgcttgagcctgagaaatccatcgtattttgccgtactaaaaaagaggtt
gatagactctccacacaactcatggcagtagggtatgccgcaaaaggacttcatggggat
atggagcaaaaccaacgtgagagcgttattaaggcgtttcgtagttcacaaattgagatt
cttgttgcaaccgacgttgccgcacgtggtcttaacgttgctgacatcagccacgttttt
aactaccatatgccatttgatccagagagttatgtacatagaattggacgaacaggacgt
gcgggtaaaaaagggactgcgattacgcttgtaacgcctattgagtttcactcaatgcag
agaattggtaaaaaagttggctcaaaaatcgaacacagaattgtgccaagtttgagagat
gttaaagagaacaaactggttaaaattgcagatgatattaaaaacgcagatattcatgag
agtgcagttaaacttctagctcttttagaagaagagatggatatgtctcaaattgcgctt
aaacttctctccaatcttttaaaagagaacagccccgtaggaccagataaaatcggactt
gataaaaaaaccttagaaaatgtggttaaaaacattgaagagcgtgaaaacagccgtggc
ggacgtggcggttatagaggaaactcaggtggtagaagcagtggcggttatagaggaaac
tctagtggaagccgtgatggtggtagctacagaggaacgtcaagtggttcacgtgatggt
ggcggctacaaaggctctaaccctagagatgctggaagcagagactcacgtcctccacga
agtgacagcgcaccacgtggtgagagccgtaacccatttgcaaaagagggtagctcaaca
ggttcacgtgatggcggcggatacaaaggtacacgtgatagcggtgatagcagaccaccc
cgcgctccaagagccgatagaccaagcgcaccacgtagcgatgcaggtcgcgctccaaaa
gccgctcctcgtaacgcttacaaaaaagattaa
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