Sulfurospirillum barnesii: Sulba_2468
Help
Entry
Sulba_2468 CDS
T02139
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
sba
Sulfurospirillum barnesii
Brite
KEGG Orthology (KO) [BR:
sba00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sba03032
]
Sulba_2468
03400 DNA repair and recombination proteins [BR:
sba03400
]
Sulba_2468
Enzymes [BR:
sba01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Sulba_2468
DNA replication proteins [BR:
sba03032
]
Prokaryotic type
DNA Topoisomerases
Sulba_2468
DNA repair and recombination proteins [BR:
sba03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Sulba_2468
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
DUF7340
DNA_ligase_ZBD
HVO_2753_ZBP
Toprim_4
AAA_lid_PRS2_C
Zn_ribbon_TFIIB
Zn_ribbon_RPB9
Zn_ribbon_PaaD
GpA_ATPase
Motif
Other DBs
NCBI-ProteinID:
AFL69735
UniProt:
I3Y0L1
LinkDB
All DBs
Position
2419110..2421194
Genome browser
AA seq
694 aa
AA seq
DB search
MEKSLKNLIIVESPTKAKTIKNFLGKNYTVVASKGHIRDLPKSSFGIKIENQTFIPEYRV
PKDHASVVKEMKELAKEADQVYIATDEDREGEAIGFHIATAIGKDPKSLPRIVFHEITKH
AITHALENPRTLDESSINAQQARRLLDRIVGYKLSPLLSSKIQKGLSAGRVQSSSLKIIV
DREKEIKAFQSEEFWSLDALFNKTIDALLVEFEGEKIEKMSIGNQERAYAIKEKLLKEAF
HVALLEKKERESSPSPAFMTSTLQQSASSALGYSPKKTMMLAQTLYEGVKTHQGVQGVIT
YMRTDSLNISKEAIEAAREQILNQYGKAYLPEKARFYANKSKSAQEAHEAIRPTILEFTP
AIASAYLASDELKLYALIYNRFLASQMNNARFESQTLIFESQSGKFKASGRKLLFDGFYK
VYGDNDKDKLLPDLALKQDVALSKLDANQHFTEPPSRYSEASLIKKLESLGIGRPSTYAP
TISVLSAREYINIEKKQIVPTEVAFQVTELLEQHFPQIVDSSFTSNMEERLDLIAEDKED
WQAILWNFYEPFEAQVAKGKTEIQSQKVIVFTGEMCPECGKELVRRKGRFGEFIACSTYP
TCKYTQNLKKVSESAPKEHVKLAVPCPECGGDIIERSSRRGKFFGCGNYPKCKFISNYEP
TDKKCPECGYIMAKRELRKKEIYECIKCKHKEEA
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaatcattgaaaaatctcatcattgtggaatcacccactaaagccaaaacgatt
aaaaattttttaggtaaaaattacaccgttgtcgcctctaaagggcatattcgagacctt
cccaaaagcagttttggcattaaaatagaaaaccaaacctttatccccgaataccgtgta
ccaaaagatcacgccagtgtggttaaagagatgaaagagctggcaaaagaagccgatcaa
gtctatatcgcaaccgatgaggatagagaaggagaagccattgggtttcacattgccacc
gccattggtaaagaccctaaaagcttgccacgtattgtttttcatgaaattactaaacat
gccattacccatgcgctagaaaatcctcgcactttagatgaaagcagtattaacgcacaa
caagccagacgcctgctcgatagaattgtaggctataaactctctcccctgctctcctca
aaaatccaaaaaggcttaagtgcggggcgtgtgcaatcttctagccttaaaataattgtc
gatagagaaaaagagataaaagcctttcagtcagaagagttttggagccttgatgcactc
tttaacaaaaccattgacgctttattggttgagtttgagggtgaaaaaattgaaaaaatg
agcataggcaatcaagagcgtgcctatgccatcaaagaaaaacttttaaaagaagctttt
catgtcgcccttttggagaaaaaagagcgtgagagttctcccagccctgcttttatgacc
tcaaccttacaacaaagtgcctccagtgcgttggggtattcgcctaaaaaaacgatgatg
ctcgcacaaaccttgtacgagggtgttaagacccatcaaggcgttcaaggggttattacc
tatatgagaaccgactcgcttaatatctctaaagaggcgattgaagcggcacgtgagcag
attttaaatcaatacggcaaagcctatctgcctgaaaaagctcgtttttatgccaacaaa
agcaaaagcgcacaagaagcacacgaagcgattcgtccgaccattttggagttcacccca
gcgattgcaagtgcgtatttggcttctgatgagctcaaactctacgcactcatctacaac
cgctttttagcctcacaaatgaacaatgcccgttttgaatcccaaacgcttatctttgaa
agccaaagtggtaagtttaaagccagtggtcgcaaactcctttttgatggcttttacaaa
gtctatggcgataatgacaaagataaattgcttccagatttagcgcttaaacaagacgtt
gcgttaagtaaacttgatgccaatcaacactttacagagccaccttctcgctactcagaa
gccagtttgattaaaaaattagagagccttggtattggcagaccttccacgtatgcgcca
actatctcggtgttaagtgcacgtgaatacatcaatattgaaaagaagcaaattgtccct
actgaagtggcgtttcaagtcacggagcttttagagcaacactttcctcaaattgtagac
tcctcttttacctcaaacatggaagagcgcctagacctcattgcggaggataaagaggat
tggcaagccattttatggaatttttacgaaccgtttgaagcgcaagttgccaaaggaaaa
acagagattcagagccaaaaagttattgtcttcacaggcgaaatgtgccctgagtgtggt
aaagagcttgtgcgacgaaaagggcgttttggtgagtttattgcatgcagtacgtatcct
acatgtaaatacacacaaaaccttaaaaaagtgagtgaaagtgctcctaaagagcatgtc
aagcttgcggtaccttgtcctgagtgtggtggcgatattattgagcgaagctcccgtcga
ggcaaattttttggctgtggtaattaccccaaatgcaaatttatctccaattacgaaccc
actgataaaaaatgccctgaatgtggctacattatggcaaaacgagaactacgtaaaaaa
gagatttatgagtgcattaaatgcaaacacaaagaagaggcgtaa
DBGET
integrated database retrieval system
