KEGG   Abyssicoccus albus: BVH56_04720
Entry
BVH56_04720       CDS       T04690                                 
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
sbac  Abyssicoccus albus
Pathway
sbac02024  Quorum sensing
sbac03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sbac00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BVH56_04720
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    BVH56_04720
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sbac03019]
    BVH56_04720
   03036 Chromosome and associated proteins [BR:sbac03036]
    BVH56_04720
Messenger RNA biogenesis [BR:sbac03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     BVH56_04720
Chromosome and associated proteins [BR:sbac03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    BVH56_04720
SSDB
Motif
Pfam: Hfq Hfq_1 DUF5608 CTC1_2
Other DBs
NCBI-ProteinID: AQL56266
LinkDB
Position
complement(892302..892496)
AA seq 64 aa
MANVDLQDKFLNDFKTSKTLVTVFLLNGYQMKGEIIDFDKYVILLKVDNQEHLIYKHAIS
TFVK
NT seq 195 nt   +upstreamnt  +downstreamnt
atggctaatgttgatttgcaagataaatttttaaatgacttcaaaacatcaaaaacttta
gttactgtatttttattaaatggctatcaaatgaagggtgaaattatcgattttgataag
tatgtgatcttgctaaaagtagacaatcaggaacatttgatttataagcatgcaatttca
acatttgtgaagtaa

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