Abyssicoccus albus: BVH56_04880
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Entry
BVH56_04880 CDS
T04690
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sbac
Abyssicoccus albus
Brite
KEGG Orthology (KO) [BR:
sbac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sbac03016
]
BVH56_04880
Enzymes [BR:
sbac01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
BVH56_04880
Transfer RNA biogenesis [BR:
sbac03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BVH56_04880
Prokaryotic type
BVH56_04880
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
DNApol_Exo
Motif
Other DBs
NCBI-ProteinID:
AQL56295
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All DBs
Position
complement(931658..932659)
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AA seq
333 aa
AA seq
DB search
MDGIIPIYKPRGMTSHDVVFQLRKILKTKKIGHTGTLDPEVDGVLLICVGRATKISDYMM
NTGKTYVAQITLGIQTTTEDQTGEVIHIDHSLPEKFKNLNNHEIEDYIDSKLKTFIGEIE
QIPPMYSAVKVNGRKLYEYARNNEAVERPKRQVMIYDIKRQSQVLNAEYHLDGECYSVYT
FDIEIECGKGTYVRTLATQIAEALNTIGHMSKLTRTKSAQFKLSDSITLKDLSEMTIEEQ
NNTLLPKEYGLRHMPTIQLNEHLFKRVQYGQKLKRSLFEDLTLKVLDSSQNVIQTYANLM
EDETVLMYDNTAVAIYMPDQEDDSIVRAKKVFN
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atggatggaattattccgatatataaaccacgaggtatgacaagtcatgatgttgtattt
caattgcgtaaaatattaaagacaaaaaagattgggcatacgggtacattagaccctgaa
gtagatggcgttttactaatatgtgttggacgagcaactaaaatcagtgattatatgatg
aatacaggaaagacatacgttgcacaaattacgctcggtattcaaacaacgacagaagat
cagacaggtgaagtgattcacattgatcatagtcttcccgaaaaatttaagaatttaaat
aatcatgagatagaagattatatagattcaaagttgaaaacattcattggtgagattgaa
caaatacctccaatgtattctgctgtgaaagtaaatggccgtaaattatatgaatatgca
agaaataatgaagcggtagagaggccgaaacgtcaagtcatgatatatgatataaaaaga
caatcacaagtcttgaatgctgaatatcatcttgatggggaatgttatagtgtatataca
ttcgatattgaaattgaatgtggaaaaggcacttatgttagaactttagctactcaaatt
gcggaagccttgaatacgataggtcatatgtcaaagttgacacgaacaaaatctgcacaa
tttaaattatcagatagtataacacttaaagatttatctgaaatgactattgaagaacag
aataatacgttgttgccgaaggaatatggtttaagacatatgccaacaatacaattgaat
gaacatctttttaaaagagtacagtatggtcaaaagttaaaacggtctttatttgaagat
ttaacattaaaggtattagactcatcacaaaatgtgattcaaacatatgccaatttgatg
gaggatgaaacggttttaatgtatgataatacagcagtggcgatatatatgccagatcaa
gaagatgattcaattgtcagagcgaaaaaagtttttaattaa
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