Abyssicoccus albus: BVH56_04980
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Entry
BVH56_04980 CDS
T04690
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
sbac
Abyssicoccus albus
Brite
KEGG Orthology (KO) [BR:
sbac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sbac03032
]
BVH56_04980
03400 DNA repair and recombination proteins [BR:
sbac03400
]
BVH56_04980
Enzymes [BR:
sbac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
BVH56_04980
DNA replication proteins [BR:
sbac03032
]
Prokaryotic type
DNA Topoisomerases
BVH56_04980
DNA repair and recombination proteins [BR:
sbac03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BVH56_04980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Zn_ribbon_RPB9
HypA
Motif
Other DBs
NCBI-ProteinID:
AQL56315
LinkDB
All DBs
Position
complement(954782..956848)
Genome browser
AA seq
688 aa
AA seq
DB search
MADNLVIVESPAKAKTIEKYLGKRYKVVASMGHVRDLPRSQMGVDFENDFEPKYITIRGK
GPLIQDLKKEAKKSKKIFLASDPDREGEAIAWHLAYVFKDMDKPLKRVVFNEITKDKVKK
SFKESREINQDLVDAQQARRILDRVVGYNISPVLWKKVKKGLSAGRVQSVALRLIIDREN
EIRNFTPEEYWTLDGTFRYKKSTFKAKFLHYKDKPYKLKTKDDVDFIRQALSTDDYVVQN
IVKKEKQRKPALPFTTSSLQQDAARSLNYKARKTMMVAQQLYEGIDLKKHGGIVGLISYM
RTDSTRLSDVAVNEARNYINDEYGKQYVGNVRKSKSSNAQDAHEAIRPTSILRTPEQVKS
YLSKDQYKLYRLIWLRTVASLMSNAIFDTVRMDVVQDDVKFRANGQTLKFDGFLKIYEES
TDDKEEEHRKLPIIEEGEMVKKQSLEEAQHFTQPPPRYTEARLVKEMEEQGIGRPSTYAP
TLDTIQKRYYTKLDQKKFHPTELGEIVHESVAQYFPEIIDIGFTAEMEKQLDQIAEGNVK
WQVVLKDFYEEFKQHVDKAELEMEKIEIKDEPAGEDCEKCGSEMVIKMGRYGKFMACSNF
PDCRNTKPIVKTIGVKCPKCQKGEVVERKSKKNRLFYGCDQYPDCDFITWDKPIGRDCPK
CSEYLVLKKKGKKSQVQCVNCDYKEEQD
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
ttggctgataatttggttattgtagaatcaccggcgaaggcgaagacgatagagaagtat
cttgggaagcgttacaaagttgtggcgtcgatgggacatgtgagagatttgcctcggagt
cagatgggtgttgattttgagaatgattttgaaccgaagtatattacgattcgtggtaaa
ggtcctttaattcaagatttgaaaaaagaagcgaagaagagtaagaaaattttccttgcg
agtgacccagatcgtgagggtgaggcgattgcgtggcatttggcttatgtgtttaaagat
atggataagccgttaaagcgcgtggttttcaatgaaattacgaaggataaagtgaagaaa
agctttaaagaatctcgtgaaatcaaccaagatttagtagatgctcaacaagcacgtcgt
attttagatcgtgtcgtaggatacaatatatcacctgtgctttggaagaaagtaaagaaa
ggtttatctgcagggcgtgtacagtctgttgcacttcgattaatcattgatcgagagaat
gagattcgtaactttactcctgaagagtattggacgttagatgggacgtttagatataag
aagtcaacgtttaaagcaaagtttcttcattataaagataaaccgtataaattaaagacg
aaagacgatgttgactttattagacaagcattgtctacagatgattatgtcgtacaaaat
attgtcaagaaagaaaaacaacgcaaacctgcactgccatttacaacgtcatctctgcaa
caagatgccgcacgtagtttaaactataaagcacgtaaaacgatgatggttgctcaacaa
ttatatgaaggaattgatctaaaaaaacacggtggtattgtcggtttaattagttatatg
agaactgattcaacacgattaagtgatgtagctgttaatgaagctcgtaattacatcaat
gatgaatatggtaaacaatacgtaggtaatgtaagaaaaagtaaaagtagtaacgctcaa
gatgcacatgaagcgattcgtccgacgagtattttacgaacacctgaacaagtgaaatca
tatttatctaaagatcaatataaattgtatcgtttgatatggttaagaaccgttgcgtca
ttaatgtctaatgcaatttttgatactgtacggatggatgtcgtacaagatgacgtgaaa
ttccgtgcaaatggtcaaacattaaagttcgatggatttttgaagatttatgaagaatct
actgatgataaagaggaagaacatcgtaaattacctattattgaagaaggagagatggtt
aagaaacaatctcttgaagaagcacaacatttcactcaaccgccacctagatatacagaa
gctaggctcgttaaggaaatggaagagcaagggattggtagaccgtctacctatgctccg
acactcgatacgattcaaaagcgatattatacaaagcttgatcaaaagaaattccaccct
acagaacttggtgaaatcgttcatgaatcggttgcgcaatatttccctgaaatcatagat
attggatttactgctgagatggagaaacaattagaccaaattgctgaagggaatgtgaag
tggcaagttgtattaaaagatttctatgaagaatttaagcaacatgtagacaaagctgag
ttggaaatggaaaaaatcgagattaaagacgaacccgcaggtgaagattgtgaaaaatgt
ggttctgaaatggtcataaaaatggggcgctatggtaagtttatggcatgttcgaatttt
cctgattgtagaaatactaaaccaatcgtaaaaactatcggcgtcaaatgtccaaaatgt
caaaaaggtgaagtcgttgaaaggaaatcaaagaaaaatagattattctatggatgtgat
cagtatccagattgtgactttattacatgggataagccaataggaagagactgccctaaa
tgtagtgaatacttagttttgaaaaagaaaggtaaaaagtcacaagtacaatgcgttaat
tgtgattacaaagaagaacaagattaa
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