Abyssicoccus albus: BVH56_05835
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Entry
BVH56_05835 CDS
T04690
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
sbac
Abyssicoccus albus
Pathway
sbac03030
DNA replication
sbac03410
Base excision repair
sbac03420
Nucleotide excision repair
sbac03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sbac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BVH56_05835
03410 Base excision repair
BVH56_05835
03420 Nucleotide excision repair
BVH56_05835
03440 Homologous recombination
BVH56_05835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sbac03032
]
BVH56_05835
03400 DNA repair and recombination proteins [BR:
sbac03400
]
BVH56_05835
Enzymes [BR:
sbac01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BVH56_05835
DNA replication proteins [BR:
sbac03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BVH56_05835
DNA repair and recombination proteins [BR:
sbac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
BVH56_05835
NER (nucleotide excision repair)
GGR (global genome repair) factors
BVH56_05835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
HHH_2
HHH_5
DUF7115
PDDEXK_15
XPG_I
Motif
Other DBs
NCBI-ProteinID:
AQL56472
LinkDB
All DBs
Position
complement(1125483..1128140)
Genome browser
AA seq
885 aa
AA seq
DB search
MSNKLLLVDGNSLLFRSFHGIALLTNSKGMYTNAIFGFTRVLNKLIEKQQPTHILVAFDA
GKTTFRHSTYEAYKGGRSKTPSELKEQFVPMRNLLDAYKIKWYELPNYEADDIIGTLSSE
ADRQGIETIILTGDRDLTQLVSEHVTVFYTTNKKGQDFEEYTIPFMQEKYELTPKQIIDM
KGLMGDKSDNIPGVPKIGEKTAIKLLKEYESVENLYEHIDELKQSKMKDNLIEYKEDALM
SKALATIETNAPINVSIEDTVWDKDFDRSALVEMYKTLEFKSLLKDETFSTSPLTAAAED
NGYEDSYNTNINSLNFDKLKEDSPLYIYIEHIEDRYIHKSPLAIALSDGEQVVITKFEHI
RQHDELCSLLKDESIEKYVYDAKKVYVMFEQHDVTVKNITMDAMLGGFLLDPSVKVEGMS
QLLHQLQLVTLPSEDEFYGKGKSRTVPDQDVLNQYISQKINALMECIPTVVDKLNEQQQL
ELLKELELPLSKVLASMEVRGIHVDVNTLHSMQSEIQHRIDDIKDEIYSLAGEEFNINSV
KELGVILFEKLELPVIKKTKTGYSTAADVLTKLEDKHDIVKHILNYRTLSKLQSTYVEGL
QDEIYEDGKIHTRFNQTLAQTGRLSSLDPNLQNIPIRLEEGRLIRKAFKPFNDEYVLVAL
DYSQIELRVLAHITQDEHLIETFNNGGDIHTETARKVFNLADDTEVDSNLRRQAKAVNFG
IVYGISDYGLSENLNIPRKQAKTFIDNYLKVYPNIQKYMDQVILDAKRNGYVETLLNRRR
YIPEINSRNFHQRSFAERTAMNTPIQGTAADIIKMAMVKYDAQNFEDRYSAYLLLQIHDE
LIFEVHRDDVEAFYQDVKQLMENAYPLDVPLLVDGSYGESWYDTK
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaataagttattattagtagatggtaacagtcttttatttagatcatttcatggg
atagcgttattaacaaattctaaaggaatgtatacgaatgctatttttggatttacgcgt
gttttaaacaaactgattgaaaaacagcaaccgacacatatactggttgcatttgatgcg
ggtaagacgacatttagacatagtacatacgaagcgtataaaggcggccgttcaaagact
ccttcagaattaaaagaacaatttgtgccaatgaggaatttgttagatgcgtataagatt
aaatggtatgaactaccgaactatgaagcggatgatatcattggaactttatcgtctgaa
gcagaccgtcaagggattgagacgatcattttgacaggcgatcgcgatttaactcaactc
gtgtccgaacatgtcactgtattttatacaacgaataaaaaaggacaagactttgaggaa
tatacgattcctttcatgcaagagaaatatgaactaacacctaaacaaattattgatatg
aaaggactcatgggagataaaagtgacaatatcccaggtgtcccaaaaataggtgaaaag
acagcgattaaacttcttaaagagtatgaatctgttgaaaatttgtatgaacacatcgat
gaattaaaacagagtaagatgaaagataatttaatagagtacaaagaagatgcattaatg
agtaaagcccttgcgacaattgaaacgaatgcaccgattaatgtatcgattgaagataca
gtatgggataaagatttcgaccgttcagcattggttgaaatgtataaaactttagaattt
aaatcattgttaaaggatgaaacgttttcaacgagtccattaacggcagcagctgaagac
aatggttatgaagattcgtataatacaaatatcaattcgttaaattttgataaattaaaa
gaagattctccattatatatttatatagaacatattgaagatcgatatattcacaagtca
cctcttgcaattgcattaagcgatggtgaacaagtcgtaattacaaaatttgagcatatt
cgtcagcatgatgaattatgttcactattaaaagatgaatccattgaaaagtatgtttat
gatgcgaaaaaagtttatgtgatgttcgaacaacatgatgttacggtgaaaaatattacg
atggatgcaatgctcggtggttttttacttgacccttctgttaaagttgaagggatgtct
cagctactacatcaattacagttagtcacattaccgagtgaggatgagttttacggtaaa
ggaaaatctcgtacagtgcctgatcaggacgtattaaatcaatacatttcgcaaaaaata
aatgcattaatggaatgtatcccgacagtcgtcgataaactcaatgaacagcaacaatta
gagttattaaaagagttagaacttcctttatcgaaagttctagctagtatggaagtccgt
ggaatacatgttgatgtcaatacgctacattcaatgcaatctgaaatacagcatagaatt
gatgatattaaggatgaaatttatagtttagctggcgaggaatttaatattaattcagtg
aaagaattaggcgtaatcttatttgagaaattagaactcccagtgatcaaaaaaacaaag
actggctattcaacagcagctgatgtattgacaaaattagaagataagcacgacattgtt
aaacatatattgaattatcgaacattatctaaacttcaatcgacatatgttgaaggtctt
caagacgaaatatatgaagatggtaagattcatactcgatttaatcaaacgttagcacaa
actggacggttatctagtttagatcctaatctacaaaacataccaatccgattagaagaa
ggacgcttaattcgaaaagcatttaagccatttaatgacgagtatgttcttgttgcacta
gattattcacaaattgaattaagagtactggcacatattacacaagatgaacatttgatt
gaaacatttaataatggaggagatattcacactgaaacagcacgaaaagtatttaattta
gcggatgatacagaagtggatagtaatttaagaaggcaagcaaaggctgttaactttgga
atcgtatacggtattagtgattatggtttgagtgaaaacttaaacattcctagaaagcaa
gcaaaaacatttatcgataattatttgaaagtatatccaaatatacaaaagtatatggat
caagtgattctagatgcgaagcgcaatggatatgtggaaacattattaaatagacgccgt
tatattcctgaaattaacagtcgaaatttccatcagcgtagctttgcagagcgaactgcg
atgaacacaccgatacaaggaactgctgcagacattattaaaatggcaatggttaaatat
gatgcgcaaaattttgaagacagatatagtgcgtacttattgttacaaatccatgatgaa
cttatattcgaagtgcatcgtgacgatgtagaagcgttttatcaagatgtaaagcagctc
atggagaatgcctatccgttagatgtccctctgcttgtagatggttcatacggggaatca
tggtatgacacgaaataa
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